Gene Synpcc7942_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2573 
Symbol 
ID3775166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2652516 
End bp2653346 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content52% 
IMG OID637801023 
Productmanganese transport system membrane protein MntB 
Protein accessionYP_401590 
Protein GI81301382 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.449069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTCT TGTTGGAACC GTTGCAATAC GCTTTTATGC AGCGATCGCT CGCGGTTGCG 
CTGCTGATTG GCATTTTGGG AGCCATGGCA GGCAGTTATT TGATGGTGCA GCGTTTGGCG
TTGCTCGGTG ATGCAATCAG TCATTCTGTC TTAGCCGGTT TAGCAGCTGC CTTTGCTATG
GGATTACCGC TCGCTTTTGG CGCATTCGTT GCAGGGCTAT TGAGTGCTGC TTCGATTGAT
CTAATTCGGA CACGATCGCC ACTCAAAGCA GATGCTGCAA TGGGGATTGT GCTCTCAGCT
TTCTTTGCCT TGGGTGTGAC TTTAATCACC CTAATTCAGA AGCAAAACAA GATTGATCTC
AACCATTTCC TGTTTGGCAA CTTACTGGCA GTTAGTCCGG CGGATCTCCG TGATACTGCT
ATCGTGGCTG GACTAGTAGC GATCGCGATT GTGCTCTTTC ATAAGGAGCT GCAGTTCTAT
TGCTTCGATC GGCTAGCTGC CCAAGCAGCA GGTCTGCCTG TGCGCTGGTT TGACTTAGGC
CTCACGGTGA TTTTGGCAAT GACCATTGTG GTCGCCATGA AAGCAGTTGG AGTTCTGCTC
GTCATTGCGA TGCTGATTAC TCCACCGGCG ACGGCTTACC TGTGGGTGCG GCGCTTTGTG
CCAATGATGC TGTTGGCGAT CGCGATCGGG AGTGGTTCCA GTCTCGTCGG TCTTTACCTC
AGCTTCTTCT GGGATTTGCC CTCGGGGCCA GCCATTGTTC TGGTGGCTTC CGTCGTCTTT
GTGGTCACCC TCCTCATCAA TCCTCGCCGC AATTCGCGCA AGCAACGATA G
 
Protein sequence
MEVLLEPLQY AFMQRSLAVA LLIGILGAMA GSYLMVQRLA LLGDAISHSV LAGLAAAFAM 
GLPLAFGAFV AGLLSAASID LIRTRSPLKA DAAMGIVLSA FFALGVTLIT LIQKQNKIDL
NHFLFGNLLA VSPADLRDTA IVAGLVAIAI VLFHKELQFY CFDRLAAQAA GLPVRWFDLG
LTVILAMTIV VAMKAVGVLL VIAMLITPPA TAYLWVRRFV PMMLLAIAIG SGSSLVGLYL
SFFWDLPSGP AIVLVASVVF VVTLLINPRR NSRKQR