| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2555 |
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| Symbol | |
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| ID | 3775148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2633656 |
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| End bp | 2635086 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637801005 |
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| Product | NAD-reducing hydrogenase HoxS beta subunit |
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| Protein accession | YP_401572 |
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| Protein GI | 81301364 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.148056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA CGATTGTCAT TGATCCAGTA ACGCGGATTG AAGGCCACGC CAAGATCTCC
GTGTTTTTGG ATGATCAGGG CAATGCCGAG GCAGCGCGGT TTCACGTCGT TGAATATCGC
GGCTTTGAAA AGTTCTGCGA GGGCCGCCCC TTTACCGAAA TGGCGGGGAT CACGGCGCGG
ATCTGCGGCA TTTGTCCGGT CAGCCACCTA CTGGCCGCCG CGAAAACCGG CGACAAAATT
CTGGCGGTGC AGATCCCGCC AGCCGCGGAA AACCTGCGTC GATTGATCAA TCTGGCCCAG
ATCATCCAGT CCCACGCCCT CAGCTTTTTT CATCTCAGTA GCCCCGATTT TCTGCTGGGC
TGGGATAGTG ATCCGGCAAG GCGTAATCTC TTCGGCTTGA TTGCTGCTGA TCCAGAAACG
GCTCGCGCCG GCATCCGACT CCGGCAGTTT GGACAGCAGC TGATCGAGTG GTTGGGGGGG
CGCAAAATTC ATGCAGCTTG GGCGGTACCG GGCGGGGTGC GGAGTCTTCT CAGTCAGGAA
GGCATGGTTT GGATCCGCGA TCGCCTACCC GCTGAGCTAG CGACAGTACG GGCCACGCTC
GATCGCTTCA AACGGCTGCT CGATCGCGAG TTCCGAGAAG AAACAGCCGT CTTTGGCGAC
TTCCCCAGCT TGTTCATGGG GCTGGTGGCC GATAACGGCG ACTGGGAGCA CTACGGCGGT
CATCTCCGCT TTGTTGATAG CCAAGGACGG ATCATTGCCG ATCGCCTCAG GGAGGATGAC
TATGCCAGCT TTTTGGGTGA AGCGGTCGAA CCGTGGTCCT ATCTCAAATT TCCCTACTAC
AAGCCGTGGG GCTACCCTGA GGGGATGTAT CGGGTTGGGC CGCTGGCGCG TCTCAATGTC
TGCGATCGCA TCGGTACGGC AGGGGCGGAA GCAGAGCGAC AGGAACTGCG CGATCGCGCT
GGTGGCACAG TCACCAGCAG CTTCCTCTAT CACTACGCTC GGCTAGTCGA AATTTTGGCG
AGCCTCGAGA AGATTGCGGA GATGGTTGAA GACCCCAACC TGCAAACAGG ATTCCTGCGA
TCGCAGGCTG GGGTCAATTG TCTGGAGGCG ATTGGTGTCA GTGAGGCACC TCGTGGGACG
TTATTCCACC ACTACCGCGT CGATTCCCAC GGCAAAATCG AGCGCGTCAA CCTGATCATT
GCCACGGGCC AAAACAATCT GGCGATGAAT CGCACTGTTA CCCAAATTGC CCAACACTAC
ATTCGCCATG GGGAGGTGCA GGAGTCTTTT CTGAACCGAG TGGAGGCGGG TATTCGCTGC
TTTGATCCCT GCCTTTCCTG CTCAACCCAT ACAGCCGGAC AAATGCCCCT CAAAATCGAG
ATTTTTGACA GTCGGGGGGA ACTCTACCAA TGCCTATGTC GTGATCTCTA A
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| Protein sequence | MTRTIVIDPV TRIEGHAKIS VFLDDQGNAE AARFHVVEYR GFEKFCEGRP FTEMAGITAR
ICGICPVSHL LAAAKTGDKI LAVQIPPAAE NLRRLINLAQ IIQSHALSFF HLSSPDFLLG
WDSDPARRNL FGLIAADPET ARAGIRLRQF GQQLIEWLGG RKIHAAWAVP GGVRSLLSQE
GMVWIRDRLP AELATVRATL DRFKRLLDRE FREETAVFGD FPSLFMGLVA DNGDWEHYGG
HLRFVDSQGR IIADRLREDD YASFLGEAVE PWSYLKFPYY KPWGYPEGMY RVGPLARLNV
CDRIGTAGAE AERQELRDRA GGTVTSSFLY HYARLVEILA SLEKIAEMVE DPNLQTGFLR
SQAGVNCLEA IGVSEAPRGT LFHHYRVDSH GKIERVNLII ATGQNNLAMN RTVTQIAQHY
IRHGEVQESF LNRVEAGIRC FDPCLSCSTH TAGQMPLKIE IFDSRGELYQ CLCRDL
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