Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2546 |
Symbol | |
ID | 3775139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2626237 |
End bp | 2626956 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800996 |
Product | hypothetical protein |
Protein accession | YP_401563 |
Protein GI | 81301355 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.109536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTTCGA CAGTTCGGCC GCTGGTTCCG CAGCGTTGGA TCGCGATTGG GGACAGCACA ATTTATGGCT ACGGTGATCC AGAGGGCGGT GGCTGGGTGG AGCGGCTACG ACGTCAGTGG ATGCACCCCG ATCGCCCCGG CCCAGTGCTC TACAACCTCG GCGTCCGTGG GGATGGGGTA GAGCAAGTTC AGCAACGCCT AGAGGCCGAA TTTCGCTGTC GGGGTGAATT GCGGCGCCAA CAACCCGATG TCATCCTGCT CTCGGTCGGT ATTAATGATT CCGCCCGCAT TGGTTCTTTG AAAGGACGAC AAATGTGTCC ACGCGATCGC TTTACGGAAG CGATCCAAGC CTTGCTGCAG GAATCAAAAT CGCTTGCGCC GACCCTCGTG ATCGGCATGG TGCCAGTGTC CGAAGCGCAG ATGCCGTTCG CCGATTGCCT CTGGTTCAAC CATGCGGATC AGCGTGAATA TACGGCAATT ACGCAGCAGG CTTGTGAAGA ACTGAATCTG CCCTATCTCG ATCTGTTCAG CCGCTGGTGG GAACGGGGCG AAGAATGGTG GCAGTCTTGC CTCGGTCCCG ATGGGCTTCA TCCGAATGTC AGTGGTTATC GCGCCATATA CGAAGAGGTG CAAGCTTGGG CACCCTTACA ACAGTTGCTG TACCAGCCCA GTTTGGCTGC TGAAATCGCC AGCGTCAGAA CCCGTGTCAC CCATTTGTGA
|
Protein sequence | MGSTVRPLVP QRWIAIGDST IYGYGDPEGG GWVERLRRQW MHPDRPGPVL YNLGVRGDGV EQVQQRLEAE FRCRGELRRQ QPDVILLSVG INDSARIGSL KGRQMCPRDR FTEAIQALLQ ESKSLAPTLV IGMVPVSEAQ MPFADCLWFN HADQREYTAI TQQACEELNL PYLDLFSRWW ERGEEWWQSC LGPDGLHPNV SGYRAIYEEV QAWAPLQQLL YQPSLAAEIA SVRTRVTHL
|
| |