Gene Synpcc7942_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2546 
Symbol 
ID3775139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2626237 
End bp2626956 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content57% 
IMG OID637800996 
Producthypothetical protein 
Protein accessionYP_401563 
Protein GI81301355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.109536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCGA CAGTTCGGCC GCTGGTTCCG CAGCGTTGGA TCGCGATTGG GGACAGCACA 
ATTTATGGCT ACGGTGATCC AGAGGGCGGT GGCTGGGTGG AGCGGCTACG ACGTCAGTGG
ATGCACCCCG ATCGCCCCGG CCCAGTGCTC TACAACCTCG GCGTCCGTGG GGATGGGGTA
GAGCAAGTTC AGCAACGCCT AGAGGCCGAA TTTCGCTGTC GGGGTGAATT GCGGCGCCAA
CAACCCGATG TCATCCTGCT CTCGGTCGGT ATTAATGATT CCGCCCGCAT TGGTTCTTTG
AAAGGACGAC AAATGTGTCC ACGCGATCGC TTTACGGAAG CGATCCAAGC CTTGCTGCAG
GAATCAAAAT CGCTTGCGCC GACCCTCGTG ATCGGCATGG TGCCAGTGTC CGAAGCGCAG
ATGCCGTTCG CCGATTGCCT CTGGTTCAAC CATGCGGATC AGCGTGAATA TACGGCAATT
ACGCAGCAGG CTTGTGAAGA ACTGAATCTG CCCTATCTCG ATCTGTTCAG CCGCTGGTGG
GAACGGGGCG AAGAATGGTG GCAGTCTTGC CTCGGTCCCG ATGGGCTTCA TCCGAATGTC
AGTGGTTATC GCGCCATATA CGAAGAGGTG CAAGCTTGGG CACCCTTACA ACAGTTGCTG
TACCAGCCCA GTTTGGCTGC TGAAATCGCC AGCGTCAGAA CCCGTGTCAC CCATTTGTGA
 
Protein sequence
MGSTVRPLVP QRWIAIGDST IYGYGDPEGG GWVERLRRQW MHPDRPGPVL YNLGVRGDGV 
EQVQQRLEAE FRCRGELRRQ QPDVILLSVG INDSARIGSL KGRQMCPRDR FTEAIQALLQ
ESKSLAPTLV IGMVPVSEAQ MPFADCLWFN HADQREYTAI TQQACEELNL PYLDLFSRWW
ERGEEWWQSC LGPDGLHPNV SGYRAIYEEV QAWAPLQQLL YQPSLAAEIA SVRTRVTHL