| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2541 |
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| Symbol | rplS |
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| ID | 3775134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2622353 |
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| End bp | 2622766 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800991 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_401558 |
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| Protein GI | 81301350 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00272416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACAATCA ACTTCGCTAA GCTAGTGGAC TGTGAGTTTT ACAGCGGGTC TATGGGCGCC
CAAGAAATCA TCCGCTCAAT TGAAGCGGAA TACACCAAGT CGGACTTGCC GACGATCTAC
GTCGGTGACA CGGTCAAAGT GGGCGTTCGC ATCCAAGAGG GTGGCAAAGA GCGCGTACAG
CCGTATGAAG GGGTTGTAAT CGCCAACAGT GGCGGTGGCA TCAACGAGAG CATTACCGTT
CGCCGCATCT TCCAAGGTGT AGGCGTTGAA CGGGTCTTCC TGCTTCACTC GCCGGCCGTC
GCTAGTGTGC AAGTTCTCCG TCGCGGTCGA GTGCGTCGGG CGAAGCTGTA CTACCTGCGC
GATCGCGTCG GCAAAGCAAC CCGCGTCAAA CAGCGCTTCG ATCGCTCGAT CTAA
|
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| Protein sequence | MTINFAKLVD CEFYSGSMGA QEIIRSIEAE YTKSDLPTIY VGDTVKVGVR IQEGGKERVQ
PYEGVVIANS GGGINESITV RRIFQGVGVE RVFLLHSPAV ASVQVLRRGR VRRAKLYYLR
DRVGKATRVK QRFDRSI
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