| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2530 |
|---|
| Symbol | rpsB |
|---|
| ID | 3775123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2611383 |
|---|
| End bp | 2612138 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800980 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_401547 |
|---|
| Protein GI | 81301339 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.963698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCA TTTCTCTTGC TGAAATGATG GAGTCTGGTG TCCACTTTGG ACACCAGACT
CGTCGTTGGA ACCCCCGCAT GGCGCCCTAC ATCTACACGG CGCGCAATGG GGTCCACATC
ATTGACCTTG TCAAAACAGC GCAATGTGTC GAAACTGCCT ACCGCTGGGT GCGCACCAAC
GCCGAGCAAG GTAAGCGCTT CCTGTTTGTT GGCACCAAAC GCCAAGCTGC TGGCATCATC
GCTGAAGAAG CCACCCGCTG CGGCTCCTAC TACATCAACC AACGTTGGTT GGGCGGCATG
CTTACCAACT GGGCCACGAT TAAAGGCCGG GTTGACCGCT TGAAAGAGCT GGAACGGATG
GAAGAAACCG GCGCTTTGGC CCTGCGTCCC AAGAAAGAAG CGGCAGTGCT GCGGCGTGAG
CTGGAGCGGC TGCAGAAATA CTTGGGCGGC ATCAAAAATA TGCGCCGCCT GCCCGACGCA
GTGGTGATCA TCGACCAAAA ACGCGAGTAC AACGCGGTCC AAGAATGCCA AAAGCTGGGC
ATTCCGATCG TGGCGATGCT CGATACCAAC TGTGACCCCG ACGTGGTCGA TGTGCCGATT
CCGGGCAACG ACGACGCGAT TCGCTCGGTC AAGCTGATTG TCAGCAAACT GGCAGACGCG
ATCTACGAAG CTCGTCACGG TGCAGCTCCG GTTGCTGAAG AGTATGACTA CGACGGCGCC
GAAGACGAGT ACGAAGACGA CGCCGACGAA GCATAG
|
|---|
| Protein sequence | MAIISLAEMM ESGVHFGHQT RRWNPRMAPY IYTARNGVHI IDLVKTAQCV ETAYRWVRTN
AEQGKRFLFV GTKRQAAGII AEEATRCGSY YINQRWLGGM LTNWATIKGR VDRLKELERM
EETGALALRP KKEAAVLRRE LERLQKYLGG IKNMRRLPDA VVIIDQKREY NAVQECQKLG
IPIVAMLDTN CDPDVVDVPI PGNDDAIRSV KLIVSKLADA IYEARHGAAP VAEEYDYDGA
EDEYEDDADE A
|
|---|
| |