| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2467 |
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| Symbol | aroE |
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| ID | 3774487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2547577 |
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| End bp | 2548443 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800916 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_401484 |
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| Protein GI | 81301276 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.502359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000000141391 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGCTC TCACCGGTCG TACTCGCTTG CTCGGCATTA TTGGCGACCC GATCGAACAT
TCCCTATCGC CGTTGATCCA AAATGCCGCG ATCGCAGAGC TGGGCTTGGA CTACTGCTAT
GTGCCCTTTC CGGTTAAGGG TGCAGATCTG GCGACGGCTC TGGCGGGCTT GGCTGCGATC
GGGGTGCAGG GCTTCAACGT CACCATCCCC CATAAGCAAG CCGTGATGCC GCTCCTCAGC
CAAGTTTCAG AACTGGCGCA GTCGGTGGGT TCGGTCAACA CCGTTTGGCA GACTGAGCAG
GGCTGGGTGG GCACTAATAC AGATGTGCTG GGATTCCTTG CGCCGCTACA AACCCTGCGC
AGCGATTGGT CCGGCTGTCG AGTCGTACTG CTGGGCTGCG GTGGTGCGGC TCGGGCGGTC
GTTGCCGGTT GCCTCCAACT GGGGTGCAGT GCGATCGCAA CGGTGGTTCG GGACGCCCAG
AAAGGAGACG CTTTTCAGCA GAGCTGGGGT GATCGCGCTG ATTCTCTGAC GATCCATGAC
TGGTCAGACA TTCCAGATGT ACTCAGCACT GCGGACTTAG TCGTCAACAC CACACCGCTA
GGCATGGACC CGCACATTGA GCGATCGCCC CTTGATAATT CAGCCGCTCA GCAATTGCGG
CCAGAAACGA TCGCCTACGA CCTGATTTAC ACGCCCAGCC CGACCCGCTT TTTGCAACAG
GCGATCGCCC AAGGCTGCCA CGCGATCGAT GGGCTAGAAA TGCTGGTTCA GCAGGGTGCA
GCTGGCCTCA AAATTTGGAC AGGTGCAGAA GCGGTTCCCG TCGATACGAT GCGATCGGTG
CTCAACGCCC ATCTGGGTTT GGCCTAA
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| Protein sequence | MSALTGRTRL LGIIGDPIEH SLSPLIQNAA IAELGLDYCY VPFPVKGADL ATALAGLAAI
GVQGFNVTIP HKQAVMPLLS QVSELAQSVG SVNTVWQTEQ GWVGTNTDVL GFLAPLQTLR
SDWSGCRVVL LGCGGAARAV VAGCLQLGCS AIATVVRDAQ KGDAFQQSWG DRADSLTIHD
WSDIPDVLST ADLVVNTTPL GMDPHIERSP LDNSAAQQLR PETIAYDLIY TPSPTRFLQQ
AIAQGCHAID GLEMLVQQGA AGLKIWTGAE AVPVDTMRSV LNAHLGLA
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