Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2462 |
Symbol | |
ID | 3774482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2542826 |
End bp | 2544106 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637800911 |
Product | sugar kinase |
Protein accession | YP_401479 |
Protein GI | 81301271 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.277689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000000164105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGTCGTTG CACTTGGCCT CGACTTCGGC ACCTCTGGAG CCCGAGCGAT CGCCTGTGAT TTTGACAGCG ATCGCTCGGT TTCTGTATCG GTCACTTTTC CCAAGACCAG TCAGAACTGG CCGCAAGTTT GGCGTGAAGC GCTCTGGCAG CTCCTCACAC AAATTCCTGC TGACTGGCGA TCGCGGATCG AGCGAATTGC GATTGATGGT ACGTCCGGCA CCGTCTTGCT CTGTGATCGC GAGGGTCAGC CCCAGACTGA GCCGCTGCTC TACAACCAAG CTTGTCCCAT TGATCTTGCG GATTTAGCAG ATTGGGTTCC GGCCGATCAT GCAGCGCTGA GTTCGACTTC TTCGCTGGCA AAACTCTGGT TTTGGCAACA GCAGTTTGGT GCGTTGCCTC CAGACTGGCA AATTCTGGCT CAGGCGGATT GGCTGTCGCT CCAACTGCAT GGATGCAGTC AGCAAAGCGA CTATCACAAT GCCCTCAAGC TGGGGTATTC GCCCGATCGC GAGCGCTTCA GTAAAAATTT GCTGGATTCA GAGCTAGGCG CGCTCTTACC AGTTGTCCAT GAACCAGGAG TTGCGATCGG TCCGATTCTG CCCGCGATCG CTCAAGAGTT TGGCCTGTCG CCTGACTGTC AGATTTGTGC CGGTACAACG GATAGCATTG CTGCTTTTCT CGCGAGTGGT GCCCACCAAC CCGGTGAAGC TGTGACTTCC CTCGGTTCCA CAATTGTTCT GAAACTGCTG AGTCAGGTCG CAGTCAGCGA TCGCCTGACC GGCGTTTACA GTCATAAACT CGGCGGCTAT TGGCTCACGG GCGGTGCTTC CAACTGCGGT GGCGCGACCC TGCGGCAGTT TTTTCCGGAT ACAGAACTCG AAAGTCTCAG TTGCCAAATC GATCCCACCA AAAAAAGCGG ACTTGATTAC TATCCGCTGC CTAGTCGAGG TGAACGGTTC CCGATCGCTG ATCCTGATCG GCTGCCTCAG CTTGAACCTC GGCCTGAGAA TCCAGTCCAG TTTTTGCAAG GGCTGCTGGA AGGACTGACG CAAGTGGAAA CCTTGGGCTA TCAGCGTTTG CAAGACCTCG GCGCAACGCC CCTAAAACGG ATTTGGACAG CGGGTGGTGG GGCTAAAAAT GCCGTTTGGC AACAACTCCG TCAACAAGCG ATCGGTGTTC CAATTGCGAT CGCCCCCAAT ACAGAAGCAG CTTTTGGGAC AGCTCGACTC GCCGCCTTTG GCTTGGCTGC ATTTCACTCG GCGGGGTTAA AGAGAACCTG A
|
Protein sequence | MVVALGLDFG TSGARAIACD FDSDRSVSVS VTFPKTSQNW PQVWREALWQ LLTQIPADWR SRIERIAIDG TSGTVLLCDR EGQPQTEPLL YNQACPIDLA DLADWVPADH AALSSTSSLA KLWFWQQQFG ALPPDWQILA QADWLSLQLH GCSQQSDYHN ALKLGYSPDR ERFSKNLLDS ELGALLPVVH EPGVAIGPIL PAIAQEFGLS PDCQICAGTT DSIAAFLASG AHQPGEAVTS LGSTIVLKLL SQVAVSDRLT GVYSHKLGGY WLTGGASNCG GATLRQFFPD TELESLSCQI DPTKKSGLDY YPLPSRGERF PIADPDRLPQ LEPRPENPVQ FLQGLLEGLT QVETLGYQRL QDLGATPLKR IWTAGGGAKN AVWQQLRQQA IGVPIAIAPN TEAAFGTARL AAFGLAAFHS AGLKRT
|
| |