| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2417 |
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| Symbol | |
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| ID | 3774701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2489314 |
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| End bp | 2490579 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800865 |
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| Product | transcriptional regulator, ABC transporter |
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| Protein accession | YP_401434 |
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| Protein GI | 81301226 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0335393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCT CTTGGCGTCG CTGCTGCCTT GCATTGGTCT TGGTTGGGAT GCTGTTCGGC
TGTGCTCGCC AGAGCCAGAG CGATGGGGAA ATTGTTTTCT GGACGATGCA GCTGCAGCCC
AAGTTCATTC CCTACTTCAC AGCACTCATC GATCGCTTTG AGCAAGAGAA TCCCGGCACC
AAAGTGCGCT GGGTTGATAT TCCTTGGTCA GCGATGGAGA GCAAAATTCT GACGGCAGTC
TCGGCGGGCA CGGCGCCAGA TGTGGTCAAC CTCAATCCAG TTTTTGCCTC GCAGTTAGCG
TCGCGGGGCG CTCTCCTCGA TCTCAGTCGG GCAGTGACAC CAGAGCAGCG CGATCGCTAT
CTGCCCAACA TCTGGCAGGC CAGTAGTTTG CAGGGTCAGG CGTTTGGGCT GCCGTGGTAC
CTGACGACGC GGATTACGAT CTTCAACCGT AATTTGATGC AGCAGGCCGG CCTACAGAAG
CCACCAGCGA CCTATGCGGA ACTAGCGAGC GCTGCGAAAC AAATCCGCGA TCGCACCGGC
AAGTATGCTT TTTTCGTCAC CTTTGTGCCC GAGGATTCCG GCGAAGTGCT GGAGTCGATG
GTGCAGATGG GCGTGAAGTT GGTCGATGAC CAAGGCAAAG CGGCTTTCAA TACTCCTGAA
GGGATCGCGG CCTTCCGCTA TTGGGTCGAT CTCTACCAAC AGGGCTTGCT ACCCCAGGAA
AGCCTGACCC AAGGCCACCG CCGTGCCGTC GAACTCTACC AATCCGGTGA GATTGCGCTG
CTGCAAACGG GCCCCGAGTT TTTGAATGCG ATCGCCACCA ATGCCCCCGC GATCGCAGCC
GTTTCAGCTC CTGCTCCCCA ACTGACTGGT GAGACGGGCA AGCGCAACGT CGCCGTGATG
AATGTTGTGG TGCCGCAAGA TGCCAGCGAT CGCGAGATTG GCCTCAAGTT CGCGCTCTAC
GTCACTGACA GCGCCAATCA ATTGGCTTTT GCGAAAGAAG CGAACGTCCT CCCTTCGACC
ACCGCTTCGC TACGGGACTA CCGCCAACAA CTGCGCGATC GCGCCGATAT CAGTTCCACC
TTGGCCCAGG CCCGCTCGAT CAGCGCCGCC CAAATGGATC AAGCTCAGGT TCTAGTTCCT
GCCGCCGCCG AGATGAAAGA GCTGCAACGG CTGATTTATG AGAATCTCCA AGCTGCGATG
CTACAGCGCA AAACTGTGGA ACAAGCCGTC GCCGATGCTG CTGCTGCCTG GAATCAAAGC
CGCTAG
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| Protein sequence | MIRSWRRCCL ALVLVGMLFG CARQSQSDGE IVFWTMQLQP KFIPYFTALI DRFEQENPGT
KVRWVDIPWS AMESKILTAV SAGTAPDVVN LNPVFASQLA SRGALLDLSR AVTPEQRDRY
LPNIWQASSL QGQAFGLPWY LTTRITIFNR NLMQQAGLQK PPATYAELAS AAKQIRDRTG
KYAFFVTFVP EDSGEVLESM VQMGVKLVDD QGKAAFNTPE GIAAFRYWVD LYQQGLLPQE
SLTQGHRRAV ELYQSGEIAL LQTGPEFLNA IATNAPAIAA VSAPAPQLTG ETGKRNVAVM
NVVVPQDASD REIGLKFALY VTDSANQLAF AKEANVLPST TASLRDYRQQ LRDRADISST
LAQARSISAA QMDQAQVLVP AAAEMKELQR LIYENLQAAM LQRKTVEQAV ADAAAAWNQS
R
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