Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2394 |
Symbol | |
ID | 3774678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2469054 |
End bp | 2470835 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637800842 |
Product | Na+/H+ antiporter |
Protein accession | YP_401411 |
Protein GI | 81301203 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00954713 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00302602 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTCTG GACTCGACAC CACCCTCCTG CTGATTGTGA CCGTGGCTGC GGGTATTGCC GCGCAGGTCT TGGCCAGTTG GGCGAAGTTG CCGGGAATTG TCTTCCTGTT GCTGACTGGC TTGCTGCTCG GCCCCGATGG CTTGAACTGG GTGCAGCCTG AGCAGTTGGG GGAAGGGCTA GAGACCCTAG TCAGCCTCAG TGTGGCGCTG ATCCTGTTTG AAGGTGGACT TAGCCTTGAT CTGCGCAACC TCCTACAGGT ATCGGGTAGC CTGCGCAATC TGATCACGCT GGGCGCGGGT ATCACGATTC TGGGCGGTGC GATCGCAGCT CATCGCTTCA GTGAGTTTCC TTGGCCGCTG GCCTTCCTCT ACGGCGCGAT CGTCGTTGTG ACTGGCCCGA CGGTGACGAC ACCGCTGCTG CGGCAAGTGC AAGCAGACCC CAAGGTCTCG ACCCTGCTAG AAGGCGAAGG CGTCCTGATC GATCCGATCG GCGCGATCGT GGCTGTGGTG GTTCTCAACT TTGTCCTGAG CGGCAGTCAG GATGTGGGGT TGGTGCTGGA AGGACTGATC CTGCGGCTCG TCGTTGGGGC GATCGCGGGC AGTGTGGGTG GCGGACTGCT GGCACTGTTC CTCCGCCAAG TCCGTTTTCT CTCCGAGGAA TTACGAACCC TCGTCGTCTT AGCCGCACTC TGGGCGATCT TTGGGGCAGC TCAAGCCGTT GTCAGTGAGG CGGGATTGCT GGCGGTGGTG ATTGCGGGTT TGTTGCTGCG GGCTGTGGCG ATTCCCGACT TGGAGGCGAT TAAGACCTTC AAGGGACAGC TAACGACCCT AGCGATCTCG ATTCTGTTTG TCTTGCTGGC AGCGGATCTC TCGATCGCGA GTCTATTTGC CTTGGGGTGG GGCGGCCCTT TGACTGTGTT GGCGCTGATG TTGCTGGTGC GCCCGCTCAG CATTGGCCTC TGCACTTGGG GCAGCGATCT GAATTGGGCG CAAAAGGCGT TTCTGAGCTG GATTGCGCCG CGTGGGATTA TTTCCGCTTC GGTGGCCTCG CTGTTTGCGA TTCTACTGAC CGATCGCGGC TTAGCCGGTG GCGCAGCGAT TAAGGCGCAG GTCTTTTTAA CGATTTTGAT GACGGTCTTC TTGCAAGGAC TTTCAGCCAA GACCGTGGCG AAAAAGCTCG GTGTTTTGGA TCGACCCGAG CAAATTGTTC TGGTTGGCGA TGACCTCGAG CTACGACTGC TCGCCATCTT GTTGGAGCAA AACAAGCAGC CTCACCAAGC GATCGCTACC GTCCCAGAGG AACCTGACTG GGAGAGCGAG AGCATCACGC TGCTACTCGG TCGCGATCAG TCCACTCCTG CGGAGCAGAC AGGGCTGACC GTGGTGGATC TCTGCCCACT CGACGATCGC GCCCATCTCT ACAGCACCCA GATCAGTGCT GACCTTTGGC AGCAACGGTT ACAGGAGCAG CGCTGTGAAC TATTCCAAAT TGAGCTGAGC GATCGCCAAG CCGTGCAGCA GTGGCAACAG GCGCTGGAAG CTGATCGGAT TTTGCCCTTG CTGCACCAAC GGGGGGAAGG CTGGGAACTC GCCCTTTTAC CCGCCGTGGC GGAAACCGGC GATCGCTTTT GGGGATTGAG TCGCGATCGC CAGTTAGCGC TGGACGAGAT TGAGTGGCAG GACTGGCCTG CCGATTGGTC GTCTAGCCCT GAGCCGCCGC GATCGCAGCC TGAAGACGCG GTTGAGCTTG CCCCGCCTGA TGCAGCAACA CCCAGCTCGT AA
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Protein sequence | MDSGLDTTLL LIVTVAAGIA AQVLASWAKL PGIVFLLLTG LLLGPDGLNW VQPEQLGEGL ETLVSLSVAL ILFEGGLSLD LRNLLQVSGS LRNLITLGAG ITILGGAIAA HRFSEFPWPL AFLYGAIVVV TGPTVTTPLL RQVQADPKVS TLLEGEGVLI DPIGAIVAVV VLNFVLSGSQ DVGLVLEGLI LRLVVGAIAG SVGGGLLALF LRQVRFLSEE LRTLVVLAAL WAIFGAAQAV VSEAGLLAVV IAGLLLRAVA IPDLEAIKTF KGQLTTLAIS ILFVLLAADL SIASLFALGW GGPLTVLALM LLVRPLSIGL CTWGSDLNWA QKAFLSWIAP RGIISASVAS LFAILLTDRG LAGGAAIKAQ VFLTILMTVF LQGLSAKTVA KKLGVLDRPE QIVLVGDDLE LRLLAILLEQ NKQPHQAIAT VPEEPDWESE SITLLLGRDQ STPAEQTGLT VVDLCPLDDR AHLYSTQISA DLWQQRLQEQ RCELFQIELS DRQAVQQWQQ ALEADRILPL LHQRGEGWEL ALLPAVAETG DRFWGLSRDR QLALDEIEWQ DWPADWSSSP EPPRSQPEDA VELAPPDAAT PSS
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