Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2383 |
Symbol | |
ID | 3774667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2450109 |
End bp | 2451260 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800831 |
Product | nucleotide binding protein, PINc |
Protein accession | YP_401400 |
Protein GI | 81301192 |
COG category | [R] General function prediction only |
COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00694087 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGGCTCC CTGCCCCGAG GCTGGCGCGA TCCCGTGCAG CCACAGAGTT TGCGCCGCTT CGGTTCGCGA CTATGTTAGA CGCTTTGATT ATTCTGCTTT TTTTGATCAC CGGCGCGGTA ACCGGTTTCC TGGGAGTTGA TCTGCTGCCG GAACGTGCTC TGCAACAGGT AACGGATCTG GAGGGGCTGC GCTTTGTGGT CGCCGGATTC ACTGCTTTGT TTGGTGGTTT GTTCGGCCTC TTGGCACAAG CCGCAGTTCG ACGGCTGCAG TTGCAAGCAC GGCAAATGCC CACGGATCAG TTGATTAGCC GAGCGGTGGG GCTCATTCTT GGGTTGGTGA TCGCCAACCT GATCCTGACG CCCATTTTCT TGCTCCCCAT TCCGACGGAG TTTGTCTTTC TCAAACCCTT GGCTGCAGTA ATCGGCAGTA TCGCTTTCGG CATGTCGGGA ATCACCTTGG CCGATACCCA CGGGCGCACC CTGATTCGGC TGGTCAATCC CGGCTCCGTT GAGTCGGCGC TGCTAGCCGA AGGAACGCTC AAGCCTGCAA TCAGCAAGGT GATCGATACC AGCTGCATCA TCGATGGCCG GATTGAAGCC CTGATCGAGA CTGGCTTTTT GGAAGGGCGG CTGATTGTGC CGCAGTTTGT CTTGCAAGAA CTGCAGCAAC TCGCAGATGC CAGTAATGAC CAAAAGCGAT CGCGGGGACG GCGGGGTTTG GACGTCCTGA ACCGGCTACG CGAAACCTAT GCGCCCCGCA TCTCAATCAA CAGTGCTGAC TACGATGACA TCGGTACGGT AGATGCCAAG CTCGTCCGTT TAGCCCAGGA TCTGCAAGCA CCGCTGTTAA CGGTGGACTA CAACCTCAAT CGGGTTGCCA GCATTCAAGA GGTCACGGTC CTGAATATCA ATGACCTCGC GAAAACGCTA CGCCCCACCT ATCTACCGGG CGATCGCTTC GACCTACGGA TCCTCAAGGA AGGCAAAGAA GCCGCTCAAG GCGTGGGCTA TCTCGAAGAC GGCACGATGG TTGTTGTCGA AGAAGGCCGC CCCTTCATCG GCAGTGAAAT TGCGGTGATG GTGACCGGTG CCTTGCAAAC TTCTGCCGGT CGTCTGATCT TTGCTAAGCC TGTTTCGCTG ATGCCCGCCT AG
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Protein sequence | MGLPAPRLAR SRAATEFAPL RFATMLDALI ILLFLITGAV TGFLGVDLLP ERALQQVTDL EGLRFVVAGF TALFGGLFGL LAQAAVRRLQ LQARQMPTDQ LISRAVGLIL GLVIANLILT PIFLLPIPTE FVFLKPLAAV IGSIAFGMSG ITLADTHGRT LIRLVNPGSV ESALLAEGTL KPAISKVIDT SCIIDGRIEA LIETGFLEGR LIVPQFVLQE LQQLADASND QKRSRGRRGL DVLNRLRETY APRISINSAD YDDIGTVDAK LVRLAQDLQA PLLTVDYNLN RVASIQEVTV LNINDLAKTL RPTYLPGDRF DLRILKEGKE AAQGVGYLED GTMVVVEEGR PFIGSEIAVM VTGALQTSAG RLIFAKPVSL MPA
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