| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2349 |
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| Symbol | |
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| ID | 3774632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2416387 |
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| End bp | 2417580 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637800797 |
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| Product | twitching motility protein |
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| Protein accession | YP_401366 |
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| Protein GI | 81301158 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA CCTCGCGCCT GCCACTCCCA CCGCCTCCCC CTCCCTTTGG TGCAGGTGGA
CTGTCTGCGA TGCCCGTCAC CCAGGTCAGC GCTTCCCCGG CAACCCCAGC AGCCGTGCCC
CAACGATCGG CCAATCAGCC AACCCTTGCC GAAATTGTGC GGCAGGCCTA CGAGCACGAT
TACTCGGATG TCCACCTTGG CGTGGGGGAA GTGCCGCGTT TTCGCGATCG CGGTGAAATT
GTGCAAACAA CCTATCCAGT CACCGACACA GCTACCTTTA ACGCCTGGCT GCGCGAGGTT
TTGACCGAAG CGCAAGTGCG TGAATTTGAG CAGGGATTGG ACTTCGACGG CGCAACTCAG
TACGACTTTG CGCGGGTACG GATCAACATC TTTGGGTCGC TGCGAGGTCC CTCGATGGTG
ATGCGGTTAA TTCCGCTGCG CATTCTCAGC CTCGATGAGC TGAGCCTACC GCCGGTTTTC
CGCGACATCT GCTACTACCC CAAAGGACTG GTACTGGTCA CCGGCCCCAC AGGGTCAGGC
AAGTCGACCA CGCTGGCCGC CATGATTGAT TTCATCAATC AGGAAATGGC GAAGAATATC
ATCACCATCG AAGACCCGAT TGAATTTGTT CACCAAAGTC AGCGATCGCT CATTAAGCAG
CGGGAAGTCG GCGTTCATAC CCGTCAATTT GAAGCAGCAC TACGGGCCTC TTTGCGTGAG
GATCCTGACA TTATCTTGGT GGGTGAGCTG CGCGATCGCG AAACGATCAA TACCGCTCTC
AAAGCTGCAC AAACCGGCCA CCTCGTGATG GCTACTCTGC ACACTAACAG CGCTGTCAAA
ACAATTGAGC GGGTACTCAA TATGTTTGAA CCCGCTGAAC AACCGCCTGT TCGAGTTGCC
TTGGCCGAGT CGCTCGTGTC TGTGATTGCG CAAGGTCTCT GCCGCACGAT TCACGGCAAG
CGGACTGCCT ATCACGAAAT TTTGATTAAC ACTGACGCGA TCAAGGACTA CATTATTCGC
GGCGAACTTG AGGAAGTTGA GCAACTAATT CCTAAATGTA CCTTTGACGG CATGTGCACC
AGCAATCAGT CCCTATTCCG TCTCTTTAAC GAAGGCAAAA TTAGTGAGGA GACTGCACTG
GCGCAATCTG GCAAGCCCAA TGAAATGTCT CAGATGCTGC GAGGTCGGGT TTAG
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| Protein sequence | MTDTSRLPLP PPPPPFGAGG LSAMPVTQVS ASPATPAAVP QRSANQPTLA EIVRQAYEHD
YSDVHLGVGE VPRFRDRGEI VQTTYPVTDT ATFNAWLREV LTEAQVREFE QGLDFDGATQ
YDFARVRINI FGSLRGPSMV MRLIPLRILS LDELSLPPVF RDICYYPKGL VLVTGPTGSG
KSTTLAAMID FINQEMAKNI ITIEDPIEFV HQSQRSLIKQ REVGVHTRQF EAALRASLRE
DPDIILVGEL RDRETINTAL KAAQTGHLVM ATLHTNSAVK TIERVLNMFE PAEQPPVRVA
LAESLVSVIA QGLCRTIHGK RTAYHEILIN TDAIKDYIIR GELEEVEQLI PKCTFDGMCT
SNQSLFRLFN EGKISEETAL AQSGKPNEMS QMLRGRV
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