Gene Synpcc7942_2347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2347 
Symbol 
ID3774630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2414138 
End bp2415214 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID637800795 
Producthypothetical protein 
Protein accessionYP_401364 
Protein GI81301156 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTTAA GACAGCGAAT CCAAGCAATG AGCGATTGCA ATCGCGATCC CGTGTCTCAG 
ATAACAGATC TGAGTGGTGC GCTCGTTACA ATCGTGCCAT CGCTGCTGGC CTGCGTTGGT
ATGGTGTTTG CTTCTAACTT GACCGATGTG ACCGCCGAGG CCCTGCTCTA CGACTACCGT
GAAGCGGCCA ATCCCCTGGG GCAGCGCCTG ATTGCGCGGG TTCCCTATCA AGACTGGGGT
GCAGAGCTGC ACCAAACTCC AGAGACGGCA ATCATTCCGC TCGACCTTAG CGAAGCCTTG
GGTTGCGAAG GGCCAGCAAC CTCGCCCTCC CTGCTGGCGA ACTTCGTCCA TATCTTGCCG
AATCAGGCGA TTGAAACCAC CGCGATCGCC ACCAGCCAGA TCTTTTATGT GTTGCGCGGA
CAAGGCGTGA CCCGCGTTGC CGATCAGGAA ATTGCTTGGA CGGAAGGCTG CTGCTTAGCG
TTGCCCGCCG ATGCGATCGC CACCCACTAC GCCCAGACAG ACAGTGCCTT TTACTGGGTG
CATGATGCGC CGCTCCTGCG CTACCTCGGT GTCAAGCCCG ATCGCGCCCG CTTCCAACCC
ACCCTCTACC GCCGTCAAGA TCTTGAGGCA ACTCTGGCGG CGATCGCAGC CGATCCCCAA
TCCAGAAAGG CGAATCGCCT CAGTGTGTTG CTGGCCAACC AAAACTTTCC CCAGACGCGA
ACGATCACCC ACACAATTTG GGCAATGTTT GGGTTGCTGC CACCCGATGT GGTGCAAGCC
CCCCACCGCC ATCAATCCGT GGCGCTGGAC TTGATTCTGG ATTGTCAGCC CGGTTGCTAC
ACCCTGGTGG GAACCCAGCT AGATGAGCGT GGGCAAATTC GCAATCCGGT GCGGGTCGAT
TGGCGACCTT ACTCCGTGTT TGTGACTCCG CCGGGCTACT GGCATGCCCA CTACAACGAG
TCAGGGCAGG AGGCTCATCT GCTGCCGATT CAAGATGCGG GCCTGCACAC CTATCTGCGG
ACCCTTGACA TTTTGTTTGC CCGTCACAAC GGCCAGATCT CGGACGAGGC GGCTTAG
 
Protein sequence
MTLRQRIQAM SDCNRDPVSQ ITDLSGALVT IVPSLLACVG MVFASNLTDV TAEALLYDYR 
EAANPLGQRL IARVPYQDWG AELHQTPETA IIPLDLSEAL GCEGPATSPS LLANFVHILP
NQAIETTAIA TSQIFYVLRG QGVTRVADQE IAWTEGCCLA LPADAIATHY AQTDSAFYWV
HDAPLLRYLG VKPDRARFQP TLYRRQDLEA TLAAIAADPQ SRKANRLSVL LANQNFPQTR
TITHTIWAMF GLLPPDVVQA PHRHQSVALD LILDCQPGCY TLVGTQLDER GQIRNPVRVD
WRPYSVFVTP PGYWHAHYNE SGQEAHLLPI QDAGLHTYLR TLDILFARHN GQISDEAA