Gene Synpcc7942_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2333 
Symbol 
ID3774616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2399962 
End bp2401299 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content57% 
IMG OID637800781 
ProductopcA protein 
Protein accessionYP_401350 
Protein GI81301142 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3429] Glucose-6-P dehydrogenase subunit 
TIGRFAM ID[TIGR00534] opcA protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG CTACTCCCCT CCTTTCGCTC CAAAAACCAA CGCCAATCGC GCTGGCTGAA 
ATTGAAGAAT CCCTCAGTCA GCTCTGGGCT AACCAGCAGC ACAGCGGAGC GGGTGCCTTG
GTCTCGCGGG CGGCCACCTT CAGCATCGTG GTCTATGAAC CCGAGGAGTT CCAACAGATT
CTGGCGGCTC TGGGTCTGTA CCATGGGCAC CTTGATGGAT TGCATGGTCC GATGACTCGC
GCCGCGATCG CCCAAGCCCA GACACAATTC GGGCTCCCCT CGACGGGGCG ACCTGACAGC
GCCACCTTCA AAGCCCTCCG GCAGGCCTAC CAAGCCCTGA AGCACTCGCC AAGCTTGACC
AATCAGGATC TGCGCGGTGC GGTGCTCAGC AATGTGATTG CGACGCAGAA CCCCTGTCGG
ATCGTCAGCC TCTGCCCCAC CCTCGAGGGT GATCGCCCAA TTAGTGCTGA GGTTTCGGCC
TACTGTCCGA TCACTTCAGC CAAGCAGGCT TCACTGATCT GCTGCGAAGC TGTCACCCTG
CGGGGCTCGC AGGCAGAGAT GGAAGCGATC GGTACGTTTG TCAGCGAGCT ATTGCTGCCA
GGCTTACCCC GATATGTCTG GTGGAAAGCG ACACCGAATC CCGAGCAGTT GCTCTTTCAG
CAGTTAGCCA ATTCTTGCAA CTGCATGATT TTCGACTCGT CCTACTTCAG CGATCCCGAA
GCTGAATTTC TCCGCTTCCA AGATCTAATT GACCAAGAAA CCTACATCGC CGATCTCAAC
TGGCACCGCC TTGCGGCTTG GCAAGAACTT ACTGCTGCGG CCTTTGATCC GCCAGAGCGT
CGTGATGGGT TGCTGGAAGT CGATCAACTG GTGATCGACT ACGAAAAAGG TAATCCCGCC
CAAGCCTTGA TGTACATGGG TTGGATTGCC AGTCGCTTGG GTTGGCAACC GGTGAGTTAC
CGCTGTGAAG GCGGTGAATA CGATCTCCGC CAAATTGAGT TCCGGACCGA GGATGATCGC
ATGGTCAAGG TCGAGTTGGC GGGGATTCCT GTCGGCGATC CGGGTTTAGT CTTGGGTGAT
CTGATTGCCC TGCGCCTGAC GTCCGAAAAT CCTGATGCCG ACTGCTGCAC GATTCTCTGT
TCGGAGACAA CGGGTTGTAT GCGAATGGAG GCAGGTGGTG GTGCTCAATC CTGCCGCACG
GAGCAGGTCG CTCCACCCTC TAACGAAACT TCAGAATCGC TACTGGCCAT GCAGATGCAG
CGCTGGGGAC GAGATGCTCT CTACGAGGAA AGCCTAGCGG TAATTGCGGT AGCACTCCGG
CAACGCACCC ACGCCTAA
 
Protein sequence
MTTATPLLSL QKPTPIALAE IEESLSQLWA NQQHSGAGAL VSRAATFSIV VYEPEEFQQI 
LAALGLYHGH LDGLHGPMTR AAIAQAQTQF GLPSTGRPDS ATFKALRQAY QALKHSPSLT
NQDLRGAVLS NVIATQNPCR IVSLCPTLEG DRPISAEVSA YCPITSAKQA SLICCEAVTL
RGSQAEMEAI GTFVSELLLP GLPRYVWWKA TPNPEQLLFQ QLANSCNCMI FDSSYFSDPE
AEFLRFQDLI DQETYIADLN WHRLAAWQEL TAAAFDPPER RDGLLEVDQL VIDYEKGNPA
QALMYMGWIA SRLGWQPVSY RCEGGEYDLR QIEFRTEDDR MVKVELAGIP VGDPGLVLGD
LIALRLTSEN PDADCCTILC SETTGCMRME AGGGAQSCRT EQVAPPSNET SESLLAMQMQ
RWGRDALYEE SLAVIAVALR QRTHA