Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2333 |
Symbol | |
ID | 3774616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2399962 |
End bp | 2401299 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800781 |
Product | opcA protein |
Protein accession | YP_401350 |
Protein GI | 81301142 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3429] Glucose-6-P dehydrogenase subunit |
TIGRFAM ID | [TIGR00534] opcA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG CTACTCCCCT CCTTTCGCTC CAAAAACCAA CGCCAATCGC GCTGGCTGAA ATTGAAGAAT CCCTCAGTCA GCTCTGGGCT AACCAGCAGC ACAGCGGAGC GGGTGCCTTG GTCTCGCGGG CGGCCACCTT CAGCATCGTG GTCTATGAAC CCGAGGAGTT CCAACAGATT CTGGCGGCTC TGGGTCTGTA CCATGGGCAC CTTGATGGAT TGCATGGTCC GATGACTCGC GCCGCGATCG CCCAAGCCCA GACACAATTC GGGCTCCCCT CGACGGGGCG ACCTGACAGC GCCACCTTCA AAGCCCTCCG GCAGGCCTAC CAAGCCCTGA AGCACTCGCC AAGCTTGACC AATCAGGATC TGCGCGGTGC GGTGCTCAGC AATGTGATTG CGACGCAGAA CCCCTGTCGG ATCGTCAGCC TCTGCCCCAC CCTCGAGGGT GATCGCCCAA TTAGTGCTGA GGTTTCGGCC TACTGTCCGA TCACTTCAGC CAAGCAGGCT TCACTGATCT GCTGCGAAGC TGTCACCCTG CGGGGCTCGC AGGCAGAGAT GGAAGCGATC GGTACGTTTG TCAGCGAGCT ATTGCTGCCA GGCTTACCCC GATATGTCTG GTGGAAAGCG ACACCGAATC CCGAGCAGTT GCTCTTTCAG CAGTTAGCCA ATTCTTGCAA CTGCATGATT TTCGACTCGT CCTACTTCAG CGATCCCGAA GCTGAATTTC TCCGCTTCCA AGATCTAATT GACCAAGAAA CCTACATCGC CGATCTCAAC TGGCACCGCC TTGCGGCTTG GCAAGAACTT ACTGCTGCGG CCTTTGATCC GCCAGAGCGT CGTGATGGGT TGCTGGAAGT CGATCAACTG GTGATCGACT ACGAAAAAGG TAATCCCGCC CAAGCCTTGA TGTACATGGG TTGGATTGCC AGTCGCTTGG GTTGGCAACC GGTGAGTTAC CGCTGTGAAG GCGGTGAATA CGATCTCCGC CAAATTGAGT TCCGGACCGA GGATGATCGC ATGGTCAAGG TCGAGTTGGC GGGGATTCCT GTCGGCGATC CGGGTTTAGT CTTGGGTGAT CTGATTGCCC TGCGCCTGAC GTCCGAAAAT CCTGATGCCG ACTGCTGCAC GATTCTCTGT TCGGAGACAA CGGGTTGTAT GCGAATGGAG GCAGGTGGTG GTGCTCAATC CTGCCGCACG GAGCAGGTCG CTCCACCCTC TAACGAAACT TCAGAATCGC TACTGGCCAT GCAGATGCAG CGCTGGGGAC GAGATGCTCT CTACGAGGAA AGCCTAGCGG TAATTGCGGT AGCACTCCGG CAACGCACCC ACGCCTAA
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Protein sequence | MTTATPLLSL QKPTPIALAE IEESLSQLWA NQQHSGAGAL VSRAATFSIV VYEPEEFQQI LAALGLYHGH LDGLHGPMTR AAIAQAQTQF GLPSTGRPDS ATFKALRQAY QALKHSPSLT NQDLRGAVLS NVIATQNPCR IVSLCPTLEG DRPISAEVSA YCPITSAKQA SLICCEAVTL RGSQAEMEAI GTFVSELLLP GLPRYVWWKA TPNPEQLLFQ QLANSCNCMI FDSSYFSDPE AEFLRFQDLI DQETYIADLN WHRLAAWQEL TAAAFDPPER RDGLLEVDQL VIDYEKGNPA QALMYMGWIA SRLGWQPVSY RCEGGEYDLR QIEFRTEDDR MVKVELAGIP VGDPGLVLGD LIALRLTSEN PDADCCTILC SETTGCMRME AGGGAQSCRT EQVAPPSNET SESLLAMQMQ RWGRDALYEE SLAVIAVALR QRTHA
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