Gene Synpcc7942_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2284 
Symbol 
ID3774566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2353861 
End bp2354772 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content59% 
IMG OID637800731 
Product2-hydroxy-6-oxohepta-24-dienoate hydrolase 
Protein accessionYP_401301 
Protein GI81301093 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.29683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGA TCGCGCCTGA AACCCGCCTC GGTTCAACCG TTGCCAACCT AACGGAAGAC 
ACCTCCAAGA ACCTAGCTGC CGCAATTCAG TGGCAAGCGA TCGCTACAGA TTTGCGCGAA
GCCCCGATCG AAACTAGCTT TGTGCAGTTG GGACAGGGCG ATCGCCCGCT GCTCTGTCTG
CATGGCTTCG ACAGCTCCGT GTTTGAATTC CGCCGCCTCT TGCCGCAGCT CGCAGAACAG
CATTCAGTCC GAGCGCTGGA CTGTCTGGGT TTTGGATTCA CGGAACGGCC TGAAGGGATA
GAAATTAGTC CAGATACCAT TCGGCAGCAT CTCTGGGGCT GCTGGCAGGC TTGGTATCAG
AAACCAATCG TGCTGGTTGG GGCTTCGATG GGTGGGGCGA TCGCGATCGA TTTCGCCCTG
AACTATCCCG AGGCGGTGGC CGGTTTGATC TTGATCGATA GCGCCGGTAT TGCACCGGGG
CCGTGGATTG GTCGCTTTTT GCCATCGCCC TTAGATGGCT GGGCGGTGGA CTTTCTGGGA
CGACCGGATG TGCGTCGTCG CATCAGTGAA CGGGCCTATC ACGATCCGCA GCGTTGGGTG
ACGCCGGATG CTGAAACCTG TGCGGCGCTC CATCTCCAGC AACCGGGCTG GCGCGAGGGG
CTACGACGTT TTACTCGCAG TGGCGGCTAT GGCTCGATGC GATCGCGCCT CCCTGAACTT
CGGCAACCCA CGCAACTGCT CTGGGGTCGC CAAGATCAGA TCCTCGGCAC CAAAGATGCT
GCTGTTTTTC AGCGCCTGTT ACCGCAGAGT GAGCTGGTCT GGATTGATGA CTGCGGCCAC
GTTCCGCATC TAGAACAACC CAGAGCGACG GCTGAAGCAA TCGCGACTTT TGTGGCGACT
TTACCGACTT GA
 
Protein sequence
MTAIAPETRL GSTVANLTED TSKNLAAAIQ WQAIATDLRE APIETSFVQL GQGDRPLLCL 
HGFDSSVFEF RRLLPQLAEQ HSVRALDCLG FGFTERPEGI EISPDTIRQH LWGCWQAWYQ
KPIVLVGASM GGAIAIDFAL NYPEAVAGLI LIDSAGIAPG PWIGRFLPSP LDGWAVDFLG
RPDVRRRISE RAYHDPQRWV TPDAETCAAL HLQQPGWREG LRRFTRSGGY GSMRSRLPEL
RQPTQLLWGR QDQILGTKDA AVFQRLLPQS ELVWIDDCGH VPHLEQPRAT AEAIATFVAT
LPT