| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2272 |
|---|
| Symbol | |
|---|
| ID | 3774554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2339596 |
|---|
| End bp | 2340126 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637800719 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_401289 |
|---|
| Protein GI | 81301081 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCATTC TAGAAAGGAC TGATTGGACC GCCATTGCAG TTGCCCTCGG CAGTAACTTG
GGGAACCGTG TCAAGCACCT TCAGCAGGCG ATCGCTCAGC TTGCAGCCTT ATCTAGCATT
CGCCGGCTAC AAGTCTCGCC GGTCTACCAA ACACCGCCAG TTGGCCCTCC GCAACCGGAT
TACTACAATG CTTGCGCGAT CGCAGAAACC TGTCTGGCAC CACACGATCT GTTGCAACAA
CTGCAGGCGA TCGAAGCGGC GGCAGGACGG GAACGGTTGC AACATTGGGG GCCGCGCACA
TTGGACCTCG ATCTGCTGCT CTATGGCGAT CGCCAGATTC AAACGCCCGA CTTGACGGTG
CCGCATCCTT ACCTGACCCA GCGAGCTTTT GTCCTGATCC CCCTGGCTGC GATCGCTCCA
GATTGGGTTG AACCCGTCAC TGGAGAAGCG ATCGCGACCT TGGCGCAACG GCTGGACTCA
ACTGGAATCG AGCGACTCGG TAGCATGGAA GCGTTGGCCG AGAGCCCCTA A
|
|---|
| Protein sequence | MAILERTDWT AIAVALGSNL GNRVKHLQQA IAQLAALSSI RRLQVSPVYQ TPPVGPPQPD
YYNACAIAET CLAPHDLLQQ LQAIEAAAGR ERLQHWGPRT LDLDLLLYGD RQIQTPDLTV
PHPYLTQRAF VLIPLAAIAP DWVEPVTGEA IATLAQRLDS TGIERLGSME ALAESP
|
|---|
| |