| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2250 |
|---|
| Symbol | recF |
|---|
| ID | 3773906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2317075 |
|---|
| End bp | 2318238 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637800697 |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_401267 |
|---|
| Protein GI | 81301059 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.122677 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTGC ATAGCCTTCA CCTTCAACAC TTTCGCAACT ATCGCGATCA AACGGTGCAG
TTCCAAGCTC CGAAGACAAT CCTGCTCGGC GAAAACGCCC AGGGCAAAAC CAATCTGCTG
GAAGCCGTTG AACTGTTCTC AACCCTGCGA TCGCATCGGG TCAGTCGCGA TCGCGATTTG
GTTCAGACCG GAGCTGAGTC AGCGCTTCTA ACAGCGGTTG TTGAGCGCGA CAGCGGCGAG
CAACAGTTGC AAATTCAGCT TCAACAACAA GGTCGGCGGC GGGTTCAGCG AGATGGCGAA
GTCCTACGGC GACAGCTTGA TCTGCTGGGC TCGCTCTGCA GCGTTCAATT TTCCTCCCTT
GACCTGGACT TGGTACGAGG GGGGCCCCAG CAACGCCGTG ACTGGCTCGA TCGCCTGCTG
ATTCAACTCC AGCCGATCTA TGCCCATCTG CAACAGCAAT ACGGGCGCGT GTTGCGGCAG
CGCAATGCCC TGCTGAGGCG GGCAGAGTCT CTCGATCTGG CACTGCTGGC GCCACTCAAC
TGGCAACTAG CTCAGCTCGG TGTCCACATC ATGCGGCGGC GATCGCGAGC AATTCAACGC
CTTGTGCCCT TGGCTGCCCA CTGGCACAGG GAAATTAGTG GTCAACGGGA GCAACTGATC
GTGGCCTATC AGCCCAGTGT GCTGGCCCCC GACGACACCG ATGAGGCGAT CGCGTGGCAA
GAACGAATGC TGGCGCAGAT CGAGGCTCGG CGGGCGGCGG AATTAGGTCA ACGCACCAGT
CTGGTTGGCC CCCATCGTGA TGACCTCAAT CTCAGCATCA ACGGTACTGA AGCCCGGCTT
CAAGCATCCC AAGGGCAGCA GCGCACCTTA GTGCTGTCGC TCAAGTTGGC GGAGCTGGAG
TTGATCGAAG CAGTATTGGG CGAGCCGCCC CTGCTGTTGC TGGATGATGT CTTAGCAGAA
CTGGACCTTC GGCGACAGCA ACAATTACTA GAAGCGATCG CCAACCGTTT TCAGACGCTG
ATTACAACCA CGCATCTTTC GGCCTTTGAC CAAAGCTGGG TGGAGACCGC TCAAATCCTT
ACGGTGCAGT CGGGTCATTT GCAGTCTGAA GCGGTGCCGA TGGCCCCAAG CAGCGCGTCC
CTGCATAAGT CCCTGGATAG TTAA
|
|---|
| Protein sequence | MFLHSLHLQH FRNYRDQTVQ FQAPKTILLG ENAQGKTNLL EAVELFSTLR SHRVSRDRDL
VQTGAESALL TAVVERDSGE QQLQIQLQQQ GRRRVQRDGE VLRRQLDLLG SLCSVQFSSL
DLDLVRGGPQ QRRDWLDRLL IQLQPIYAHL QQQYGRVLRQ RNALLRRAES LDLALLAPLN
WQLAQLGVHI MRRRSRAIQR LVPLAAHWHR EISGQREQLI VAYQPSVLAP DDTDEAIAWQ
ERMLAQIEAR RAAELGQRTS LVGPHRDDLN LSINGTEARL QASQGQQRTL VLSLKLAELE
LIEAVLGEPP LLLLDDVLAE LDLRRQQQLL EAIANRFQTL ITTTHLSAFD QSWVETAQIL
TVQSGHLQSE AVPMAPSSAS LHKSLDS
|
|---|
| |