Gene Synpcc7942_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2240 
Symbol 
ID3773896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2305961 
End bp2306491 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content57% 
IMG OID637800687 
Producthypothetical protein 
Protein accessionYP_401257 
Protein GI81301049 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0216182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA GCCGTGTTGT GTACCAAATC CATACTCCAG AGGAGTTTCG GGGTGGTCAC 
AGTGCAGCCC GACGTTTGGA CTTTGAGCAA CTGCGCCGCC TGTTTGAACT GACGGCCTTT
TGGGGCCGCG ATCGCAGCAT TGAACAACTC CAGATTGCGG TTCGCAATAG TGAGCCGGTC
GTCAGCGCTC ACATTGGCGA TCGCCTGCTT GGATTTGCCC GCGCCACCTC CGATGGCATC
TATCGCGCCA CCATTTGGGA TGTGATCGTC CATCCAGACT TTCAAGGGAG CGGCATCGGT
CGCAAGCTGG TCGAGACGGT ACTCAGCCAC CCCCACGTCA GCCATGCGGA ACGGGTCTAT
CTGATGACCA CGCACCAGCA GCGCTTTTAC GAAAAAGTCG GCTTTTCGGT CAACTCCACC
ACCACCATGG TTCTGTTCAA CCAAGAGCTG CCTGTCTCCT GTCAGACCAG CGATCGCAGT
GCTGAAGCCC TTGCCCTTGC AGAGGTTGTA GAACTGCCAC AGACCCCTTA G
 
Protein sequence
MSNSRVVYQI HTPEEFRGGH SAARRLDFEQ LRRLFELTAF WGRDRSIEQL QIAVRNSEPV 
VSAHIGDRLL GFARATSDGI YRATIWDVIV HPDFQGSGIG RKLVETVLSH PHVSHAERVY
LMTTHQQRFY EKVGFSVNST TTMVLFNQEL PVSCQTSDRS AEALALAEVV ELPQTP