Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2232 |
Symbol | rplC |
ID | 3773888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2298877 |
End bp | 2299518 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800679 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_401249 |
Protein GI | 81301041 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.422626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTATCG GCATACTCGG CACCAAGCTC GGCATGACCC AGATTTTCGA TGAATCTGGC AAGGCAGTTC CCGTAACTGT CATTCAGGCT GGGCCTTGCC CAATCACTCA GATCAAAACC GTGGCGACGG ATGGTTACAA CGCCATCCAA ATCGGTTTCT TGGAAGTGCG TGAAAAGCAA CTGTCCAAGC CCGAGCTAGG TCACCTCTCC AAAGCAGGTG CACCGCCCCT TCGTCACCTC TTGGAGTACC GCGTTCCCAG CACCGATGGT TTGGAGCTGG GTCAAGCCCT GACCGCCGAT CGCTTTGAAG CGGGTCAAAA GGTGGATGTG CAAGGTCACA CCATTGGTCG TGGTTTCACC GGTTATCAAA AGCGTCACGG TTTTGCCCGT GGCCCTATGA GCCACGGTTC GAAAAACCAT CGTCTCCCCG GTTCGACGGG TGCAGGGACG ACGCCGGGTC GCGTCTATCC CGGTAAGCGG ATGGCCGGTC GCTCTGGCAA CGACAAAACG ACGATTCGCG GCTTGACCGT TGTTCGAGTC GATGCAGACC GTAATCTGCT TCTAGTCAAA GGTTCGGTTC CGGGTAAACC AGGCGCTCTG CTCAACATCA CGCCCGCCAC TGTGGTCGGG CAGCAGGCCT AA
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Protein sequence | MSIGILGTKL GMTQIFDESG KAVPVTVIQA GPCPITQIKT VATDGYNAIQ IGFLEVREKQ LSKPELGHLS KAGAPPLRHL LEYRVPSTDG LELGQALTAD RFEAGQKVDV QGHTIGRGFT GYQKRHGFAR GPMSHGSKNH RLPGSTGAGT TPGRVYPGKR MAGRSGNDKT TIRGLTVVRV DADRNLLLVK GSVPGKPGAL LNITPATVVG QQA
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