| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2231 |
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| Symbol | rplD |
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| ID | 3773887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2298200 |
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| End bp | 2298832 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800678 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_401248 |
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| Protein GI | 81301040 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.402946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGATT ACGTCATTCA GGATTGGCAA GGCCAAACCG CAGGCAACAT CACAGTTGAG
CTGCGGGTCG CGAAGGAAGA AAGTGCTGCG GCGATCGTGC ACCGCGCCTT GATTCGTCAG
TTGGCCAATG CACGCCAAGG GACCCACGCC AGCAAAACTC GTTCGGAAGT TCGGGGCGGT
GGTCGCAAGC CTTGGAAACA AAAAGGAACG GGTCGCGCCC GTGCCGGTTC GATTCGGTCT
CCCCTCTGGC GGGGCGGCGG TGTCATCTTT GGGCCCAAAC CCCGCGATTA CAGCGTCAAG
ATGAACCGCA AAGAGCGTCG TTTGGCGCTG CGGACTGCCC TGATCAGTCG GAGTGCGGAT
CTGGTGGTTG TGCAAGAGTT TGCCGACCAA ATCAGCCGCC CCAAGACCAG AGATGTCGCT
GAAGCCTTGA CTCGTTGGGG CGTTGAGCCC GGTGTCAAGG TTCTGTTGAT CACGGCCGAT
CGCGACCAAA ACGTTGAGCT GTCGGTTCGC AACTTGCCGA ATGTCAAATT GATCACGGCT
ACGAACCTCA ACATTTTTGA TCTGCTGAAT GCAGATCGCA TTGTCAGCAC CAGTGCAGCG
CTGGAGAAGA TTCAGGAGGT CTACGGTGGC TGA
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| Protein sequence | MVDYVIQDWQ GQTAGNITVE LRVAKEESAA AIVHRALIRQ LANARQGTHA SKTRSEVRGG
GRKPWKQKGT GRARAGSIRS PLWRGGGVIF GPKPRDYSVK MNRKERRLAL RTALISRSAD
LVVVQEFADQ ISRPKTRDVA EALTRWGVEP GVKVLLITAD RDQNVELSVR NLPNVKLITA
TNLNIFDLLN ADRIVSTSAA LEKIQEVYGG
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