Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2168 |
Symbol | |
ID | 3773725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2248681 |
End bp | 2251065 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637800613 |
Product | ATP-dependent DNA helicase Rep |
Protein accession | YP_401185 |
Protein GI | 81300977 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.63993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCG ACTTTCTAAG CCAGCTCAAT ACCTCCCAAC GTCGAGCCGT CGAACACTAC AGCGGGCCGC TGTTGGTGGT TGCTGGTGCT GGTTCTGGCA AAACGCGGGC ACTCACCTTT CGGATTGCCC ATCTGCTGCG ACAGCATCGG GTCGATCCAG AAAACATTTT GGCGGTGACC TTCACCAATA AAGCGGCGAA GGAAATGAAG GAGCGGCTGG AGCGCTTATT TGCTCAGCAA CTGGCGGAGT TGCAGTACGG CCAGCCCTTC ACGACACTGC GAGAAATAGA AAAAACTCAA CTGCGATCGC GTGTCTATCG CGAAGTTACC AAGGATTTGT GGATTGGCAC TTTCCACGCA ATTTGTGCAC GGATTCTTCG CTTTGATATC GACAAGTATT GCGATCCCAA TGGCCGCCGT TGGACAAAGC AGTTCTCCAT CTTTGATGAA AATGATGTCC AAGGCTTAAT CAAAGAGATT GTTGGCAATC AGCTCAATTT AGATACCAAG AAGTTTGAGC CAAAATCTGT TCGCTACACA ATCAGCTCGG CTAAGAACAA TGGTTGGTCA CCCGATGAAT TTGAGCGCCA GCAGCCGAAC TATCGGGGCC GCGTGATCGG TGAGGTCTAT CGGCGTTATT TAGATCAACT AGCGGCAAAT AATGCTCTTG ATTTCGATGA CTTGTTGCTG ATTCCAGTGC AACTCTTCCG GCAAAACGAA CAGGTTTTGG CCTATTGGCA TCAGCGCTTT CGCCATGTTT TGGTTGATGA GTATCAGGAT ACAAACCGCA CTCAGTACGA TTTGATTCGG CTGCTGACAA CGAATGGTGC TGAAACGCGA GATTTTGATC AGTGGAATCA TCGCTCAGTC TTTGTCGTAG GCGATGCTGA TCAGTCAATC TATTCTTTCC GAGCCGCAGA CTTCACCATT CTGATGGGCT TTCAGGATGA TTTTGGCGAT CGTCTGCCGG ATGATGACAC TCGCACGATG GTCAAGCTGG AAGAAAATTA TCGTTCGACT GAAAACATTC TTCAGGCTGC CAATGAGCTA ATTCGTAACA ACACTGAGCG CATCGATAAG GTTTTGCGCC CCACCCGAGG TAGTGGCGAA GCGATCGCCT GCTATCGGGC TGACGATGAA ATGGCCGAAG CGGAGTATGT TGTTCAACAA ATTCGCCAGC TTGAGCAACA GCATCCTGAG TTGAATTGGG GCGATTTTGC AATTCTCTAC CGCACTAACG CTCAATCGCG AGCCTTTGAA GATTCTCTCG TTCGCTGGAA TGTTCCCTAC ACCGTCATTG GTGGCTTGCG GTTCTATGAT CGCCGCGAAG TCAAAGATAT CTTGGCCTAT CTGCGGGCGA TCGCCAATCC CTTCGATGCG GTTAGCTTAC TACGGGTGGT GAACGTTCCT AAACGCGGCG TGGGCAAAAC CACGATTGGC CGATTGGTTG ATGCTGCGCA AGAGCTAAAT GTACCCCTTT GGGAAATCCT GAGTGATTCC GAAACGGTGC AAAACCTGGC GGGGCGATCG GCGAAAGGCA TCCTAGAGTT TGCTAATTTA GTTCAGCATT TTCAAGATCA AGCAGATGAA TTACGCCCCT CCGAATTGAT TCGCCAGCTC TTAGAAGCAT CTGGTTATAT TGCTGAATTA CAACGCAGCG GCACTGATGA AGACGAGGAC CGTCGTCGGA ACTTGGAAGA GTTGGTGAAT GCAGCTGTTC AACATGAGGA GGAGAATGAT GACCCTAGCC TGATTGGCTT TTTGGGAACA GCTTCACTAG CCTCAGATGC AGATAACAAA GAAGCGAACC AGCAAGTCTC ATTAATGACT TTGCATGCTT CAAAAGGCCT TGAGTTTCCG GTTGTTTTTC TAGTTGGACT AGAACAGGGC CTCTTCCCCA GTTTCCGATC GCTCGACGAT CCGCGCGCCG TTGAAGAAGA ACGACGCCTC TGCTACGTCG GCATCACACG CGCCCAAGAG CGACTGTTCT TGACCCATGC CAGTGCTCGT CGTCTGTGGG GTGGAGGTCG AGAGCCCGCC ATTCCCTCCA ATTTCCTGAG TGAACTACCG GCAGAACTGA TCGTGGGTCA CTCACCACAG ACCCGTCGTC AGACCCAAGC AAACTTCAAG CCACCGGTTA CCCATGAGCG CCGCGCCAGC CTGCGCGATC GCGTGGCCGC GAATGCAGCC AAAGTGCAAC AAGTTCAGCA ACCGGCCCGC CATTGGCAAG TCGGCGATCG CCTTCAGCAT CGTCAGTTTG GCGTTGGACG CATCACCCGA ATTTTCGGTG CGGGCGATCG CCAATCGATT GTGGTCCAGT TCAGCGGCGC GACAGGTCAG CGCATCCTCG ATCCACGCCT AGCACCGATT GAACCCCTCG GTTGA
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Protein sequence | MSSDFLSQLN TSQRRAVEHY SGPLLVVAGA GSGKTRALTF RIAHLLRQHR VDPENILAVT FTNKAAKEMK ERLERLFAQQ LAELQYGQPF TTLREIEKTQ LRSRVYREVT KDLWIGTFHA ICARILRFDI DKYCDPNGRR WTKQFSIFDE NDVQGLIKEI VGNQLNLDTK KFEPKSVRYT ISSAKNNGWS PDEFERQQPN YRGRVIGEVY RRYLDQLAAN NALDFDDLLL IPVQLFRQNE QVLAYWHQRF RHVLVDEYQD TNRTQYDLIR LLTTNGAETR DFDQWNHRSV FVVGDADQSI YSFRAADFTI LMGFQDDFGD RLPDDDTRTM VKLEENYRST ENILQAANEL IRNNTERIDK VLRPTRGSGE AIACYRADDE MAEAEYVVQQ IRQLEQQHPE LNWGDFAILY RTNAQSRAFE DSLVRWNVPY TVIGGLRFYD RREVKDILAY LRAIANPFDA VSLLRVVNVP KRGVGKTTIG RLVDAAQELN VPLWEILSDS ETVQNLAGRS AKGILEFANL VQHFQDQADE LRPSELIRQL LEASGYIAEL QRSGTDEDED RRRNLEELVN AAVQHEEEND DPSLIGFLGT ASLASDADNK EANQQVSLMT LHASKGLEFP VVFLVGLEQG LFPSFRSLDD PRAVEEERRL CYVGITRAQE RLFLTHASAR RLWGGGREPA IPSNFLSELP AELIVGHSPQ TRRQTQANFK PPVTHERRAS LRDRVAANAA KVQQVQQPAR HWQVGDRLQH RQFGVGRITR IFGAGDRQSI VVQFSGATGQ RILDPRLAPI EPLG
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