Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2144 |
Symbol | |
ID | 3773701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2228529 |
End bp | 2229017 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800589 |
Product | nuclease (SNase-like) |
Protein accession | YP_401161 |
Protein GI | 81300953 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.149778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.293408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAC CCCTGTCTGC GCTCGGTCTG CTGCTCTTAC TGGCAACCAG TAGCTGCCAA ACACCCGGTC GATCGGCTGA AGTCAACCTG ATTAGCGACG GTGACACATT GACTGTGCAG CAAGACGGGG AGTCAGTCAA AATCCGCTTG GCTTGTATCG ATGCGCCAGA ACTAGGGCAG AAACCTTGGG GGGAGCGAGC CCGTGGGGTG TTAGGTGTCT TGGCTCCAGT TGGTAGCGAA GTGACGGTTG AGTCCTTTGA ACGCGATCGC TATGGCCGTA CGGTGGCGAC GGTTTGGCGG GAAGGGCGAT CGGTCAATCT CGAAATGGTC CGTCGCGGCT GGGCGATGGT CTACCGGCAA CACCTCCGCA ACTGCGATGC CAGTGCCTAC TTTGCGGCGG AGACTGCAGC AAGACGCGAT CGCATTGGCT ATTGGCAAGC AGGTCGCAAT CCCCAACCGC CCTGGGAGTG GCGTCGCCGT CAACGCTAA
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Protein sequence | MLKPLSALGL LLLLATSSCQ TPGRSAEVNL ISDGDTLTVQ QDGESVKIRL ACIDAPELGQ KPWGERARGV LGVLAPVGSE VTVESFERDR YGRTVATVWR EGRSVNLEMV RRGWAMVYRQ HLRNCDASAY FAAETAARRD RIGYWQAGRN PQPPWEWRRR QR
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