Gene Synpcc7942_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2142 
Symbol 
ID3773699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2226468 
End bp2226803 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content59% 
IMG OID637800587 
Producttranslation initiation factor Sui1 
Protein accessionYP_401159 
Protein GI81300951 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.183879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.356716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTCAAA AGAAAAATAG CGATCGCATT GTTTGGCGCG AGTTTGGTAG TCAGGATGCT 
GCGTTGGAAC GAGGGCAGCC CGATCGCCCG CCCGCTCAGC ATGATCTCCG CATCCAGTGC
AGCCGTAAGG GGCGCGGCGG CAAAACCGTG ACGATCATCA CGGGCTTCCA GCATCGGCCA
GAAACGCTGG CGAGCCTGTG CAAAAAACTG AAGGCGCGTT GTGGCAGTGG CGGTACCGTT
AAGGACGACA CGATCGAGAT TCAGGGCGAC CACCGTCAAA CCCTGCTAGA GGCACTCAAG
GGCTTGGGCT ACGGTGCAAA ACTGAGCGGC GGCTGA
 
Protein sequence
MAQKKNSDRI VWREFGSQDA ALERGQPDRP PAQHDLRIQC SRKGRGGKTV TIITGFQHRP 
ETLASLCKKL KARCGSGGTV KDDTIEIQGD HRQTLLEALK GLGYGAKLSG G