Gene Synpcc7942_2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2136 
Symbol 
ID3773693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2215466 
End bp2216287 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content58% 
IMG OID637800581 
Productdihydrodipicolinate reductase 
Protein accessionYP_401153 
Protein GI81300945 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.337218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.177934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCACC CGATTCCTGT GGTTGTCAAT GGGGCGACTG GCAAGATGGG GCGCGAAACG 
ATCAAGGCGA TCGCAGCGGC GGATGATGTG ACCCTCGTGG GGGCGATCGC CCGCAGTGCG
GATGTGCAGG GGCAAGACAT CGGCGAGATT GTCGGGCTTG GGCCGCTGGA AGTGCCGGTG
ACCAATGACC TTGAAGGAAT GCTCTGCCTG GCTTCGCAGG AGCGGGAAGT GCCCGTTGTT
GTCGATTTCA CCCACCCTGA CTGCATCTAT GACAACGTCC GCAAGGCGAT CGCCTATGGT
GTGCGGCCAG TTGTGGGCAC CACCGGCTTA AACAATGAGC AGTTGCAGGA ACTAGCGGAG
TTTGCCGAAA AAGCCAGCGT TGGCTGCTTG GTAATTCCTA ACTTTTCGAT TGGCATGGTG
CTGCTGATGC AGGCAGCGAT TCAGGCCAGC CGCTTCTACG ACCACGTCGA AATTTTGGAA
CTGCATCACG ACCAAAAGGC GGATGCGCCC AGTGGCACGG CCATCAAAAC CGCGCAGATG
CTGGCAGAAC TGGGCAAAAC CTTCAATCCT CCCAAGGTAA CCGAGAAGGA GACGATGCCC
GGCGCCCGCG GTGCTGTTGG CCCTGAAAAT ATCCGCATTC ACAGCGTCCG TCTGCCGGGA
CTGATTGCCC ACGAAGAGGT GATCTTTGGT GCGCCCGGTG AAATTCTGAC CCTGCGTCAC
GACACCATGG ATCGCAGTTG CTATATGCCG GGTGTGCTGT TAGCAGTGCG GAAGGTGCGG
CAACTGACGG GGCTGATCTA CGGCCTCGAT CGCATTCTCT AA
 
Protein sequence
MAHPIPVVVN GATGKMGRET IKAIAAADDV TLVGAIARSA DVQGQDIGEI VGLGPLEVPV 
TNDLEGMLCL ASQEREVPVV VDFTHPDCIY DNVRKAIAYG VRPVVGTTGL NNEQLQELAE
FAEKASVGCL VIPNFSIGMV LLMQAAIQAS RFYDHVEILE LHHDQKADAP SGTAIKTAQM
LAELGKTFNP PKVTEKETMP GARGAVGPEN IRIHSVRLPG LIAHEEVIFG APGEILTLRH
DTMDRSCYMP GVLLAVRKVR QLTGLIYGLD RIL