Gene Synpcc7942_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2135 
Symbol 
ID3773692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2214773 
End bp2215456 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID637800580 
Producthypothetical protein 
Protein accessionYP_401152 
Protein GI81300944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.392364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.325855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTC CCATCACCGA AGCCAGTACG AGGCAACTGA TTCCTGCGAT CGCGACGGGG 
CCGCAGTATC GCTACTGCTG GGGAAAGCCT CAGGACTTTC TGCGGCGGCT CCTGATCTCC
GTGATCGTAG CGGTGGCTGC CTTGCTGGCC GAAACCCTGG CGGGGGTCTC CGGGGAAATT
GCCCTCGTCG TCGGCATTCT GGGCGGCTTC TTTTGGTGGT GGGCACCGAT CGCGATCGCT
GCTCAACGCA ACTACCGCCT GCGCCGCTAT CGCTATGCCG CCTTTTGGGA GGGGGAGATC
GTTGATCTTT ACCGCAGCCA AGCCCGCATT GGTACAGAGG AAACGGTCAA TTCCCAGGGG
CGGTTGGTGC TGATTGACAA GGTCGAAACT CGCGTCAATC TGGAGCTGCT GGACGAGAAC
GACTTTGAGC TGCGGCTACA GGTCCCGATC AAAAACGACT ACAAGAAATT GCGACGGGGG
CAACTAGTGC AGTTGCTCCT GTTTTCCAAC GATCCGCAGC TGGCCAAGCT GGAAGCCTAC
AGCGACGCCT ACGTGCCCGC CTTGGATCTC TGGGTGAGTG ACTACCCCTA TCTGAGCCGC
GAAGCCTTCA AATTCACCAG TGCCCGACTC ATTTCCGAAA CTGAGGCAGC TCGCTATGAT
GACCGGGGTC GCGGACGCCG CTAG
 
Protein sequence
MLIPITEAST RQLIPAIATG PQYRYCWGKP QDFLRRLLIS VIVAVAALLA ETLAGVSGEI 
ALVVGILGGF FWWWAPIAIA AQRNYRLRRY RYAAFWEGEI VDLYRSQARI GTEETVNSQG
RLVLIDKVET RVNLELLDEN DFELRLQVPI KNDYKKLRRG QLVQLLLFSN DPQLAKLEAY
SDAYVPALDL WVSDYPYLSR EAFKFTSARL ISETEAARYD DRGRGRR