| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2101 |
|---|
| Symbol | |
|---|
| ID | 3774320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2182941 |
|---|
| End bp | 2183825 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800546 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_401118 |
|---|
| Protein GI | 81300910 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.338319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGG CACGGCGCGG CATCATTCTG GCGGGTGGAT CTGGCACTCG GCTCTATCCC
GCCACCTATG CAGTCTCCAA ACAGCTGCTG CCGGTCTATG ACAAGCCGAT GATTTACTAC
CCGCTCAGCA CGCTGATGTT GAGTGGCATT CGTGAGATTT TGATTATCTC CACCCCCCAA
GACACCGATC GTTTTGCGCA GCTCTTGGGC AACGGCGATC GCTGGGGACT CTCGCTGAGC
TATGCCATTC AGCCGGCTCC CGAAGGTCTG GCGCAAGCCT TTTTGATTGG CGAATCATTC
CTGAATGGCT CACCCGCCGC TCTGATTCTG GGCGACAACC TTTTTCATGG TGACGATCTG
GCGGTACAAC TCCAGCAAGC CAGTCAGCGT TCGCAGGGGG CAACCGTTTT TGCCTACGGC
GTTGCCGATC CAGAGCGCTA TGGCGTTGTA GAATTCGATG CCCAGCAGCG GGTGCTTTCG
ATTGAAGAGA AGCCCAAGAA ACCGCGATCG CGCTATGCCG TCACGGGACT CTACTTCTAC
GATCAGCAGG TCGTAGAGCT AGCAAAGCAA GTCCGACCCT CAACCCGAGG AGAGCTAGAG
ATCACCGACC TCAACAATGC GTACCTTCAG CGGGGTCACC TGCGGGTGGA ACTGCTCGGG
CGCGGGATGG CTTGGCTGGA CACCGGCACC CACGACAGCC TGCTCGATGC CGCCAGTTTT
ATCCAGACAC TGGAAAAACG GCAGGGGCTC AAGATCGCCT GCCCGGAAGA AATCGCCTAT
CGCCAGGGCT GGATTACGGC TACCCAGCTT GAGCAGTTAG CTGAGCCACT CCGTAAAAAT
GGCTATGGCC AGTATCTACT GGACCTCTTG CACAATCCTC TCTAA
|
|---|
| Protein sequence | MTEARRGIIL AGGSGTRLYP ATYAVSKQLL PVYDKPMIYY PLSTLMLSGI REILIISTPQ
DTDRFAQLLG NGDRWGLSLS YAIQPAPEGL AQAFLIGESF LNGSPAALIL GDNLFHGDDL
AVQLQQASQR SQGATVFAYG VADPERYGVV EFDAQQRVLS IEEKPKKPRS RYAVTGLYFY
DQQVVELAKQ VRPSTRGELE ITDLNNAYLQ RGHLRVELLG RGMAWLDTGT HDSLLDAASF
IQTLEKRQGL KIACPEEIAY RQGWITATQL EQLAEPLRKN GYGQYLLDLL HNPL
|
|---|
| |