Gene Synpcc7942_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2085 
Symbol 
ID3774304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2165683 
End bp2166759 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content56% 
IMG OID637800530 
Productanion transporting ATPase 
Protein accessionYP_401102 
Protein GI81300894 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0003] Oxyanion-translocating ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.132468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAA TTCTTTCGTT CCTGGGTAAG GGCGGTAGTG GTCGAACAAC GGCTGCGATC 
GCCCTTGCTC GTCAGTCGGC TGCCAGCGGT GCTCGGACCT TGGTGCTGAG TTTGGGCAGT
GATCCGTCGC CAGATATGTT GCTGGACAAA GATTTGGTGG CAACACCGAC CGTGATCTCG
CCCAACTTGG AGGCGGTACG AATTCCGTCT ACGGTAGCGA TCGGCAAGGG ATGGGAAGAA
TTACAAGCCC TTGAAGGTCA GTATCTGAAG ACACCCTTCC TCCGCAACAT TTACAGTTCT
GAGCTGGCCC TGTTGCCGGG CTTTGAGCCT TTATTACTGC TGACGGAATT GCGGCGTTGG
CTCGAGCAAG GCTACGACCG GATTTGCCTT GATGGCCTCT CTAGTCCAGA ACTACTGCGC
CTTTGGGGCG TTCCTGAGAG TTTGGATTGG TATCTGCGGC GCTTTCGAGG GGCGATCGCC
GATTCAGAGT TTGGTCGGAA TTTAGGGCCG TTTTTACCTG CTTTATCTGC GGCGGTCTTT
AGTGTTGGCC TCAGTCTTGA TGACTGGGGA CCGGCGGCTC GCCTGCTAGA AACATCGCTC
GAACAAGGGC GATCGCTCTT GGCCGATCCG CGCAAAGCAA TGGCGATTCT GACCACGCGC
AGCGATCGCG TCTCGCAGGC CGTGGCTTTG CAATGGTGGG GGGCGGCGCA ACCGATTGGT
TTACGTGTCG GTGCCGTACT CGCTAGCGAG AGTTCAGGCT TGGACGACCT CAAGCGCGAC
TTTGCGCCCT TGCCCGTTTT TTCACTGAGT TCTGCCGCGT CTGATTCGGT GCTGCCCAGC
TTTGATGTCT TGAATCATGC CCCGGAGCCA CTGAGTATCG ATTTGCAGGC GCGACAGATT
CGGTTGTTCT TGCCGGGCCT CGCCAAAGAA GCGGTCAAAC TCTCGCAATC CGGCCCAGAG
ATTACCATTG AAGCCGGCGA TCAGCGGCGT AATTTACGGT TGCCGGTTGC CCTGCAAGGA
CGAGCTGTGA CTTCGGCTCG TTTCCAAGAG CAGTCTTTGA TCCTGTCCTT TCAATAG
 
Protein sequence
MTQILSFLGK GGSGRTTAAI ALARQSAASG ARTLVLSLGS DPSPDMLLDK DLVATPTVIS 
PNLEAVRIPS TVAIGKGWEE LQALEGQYLK TPFLRNIYSS ELALLPGFEP LLLLTELRRW
LEQGYDRICL DGLSSPELLR LWGVPESLDW YLRRFRGAIA DSEFGRNLGP FLPALSAAVF
SVGLSLDDWG PAARLLETSL EQGRSLLADP RKAMAILTTR SDRVSQAVAL QWWGAAQPIG
LRVGAVLASE SSGLDDLKRD FAPLPVFSLS SAASDSVLPS FDVLNHAPEP LSIDLQARQI
RLFLPGLAKE AVKLSQSGPE ITIEAGDQRR NLRLPVALQG RAVTSARFQE QSLILSFQ