| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2079 |
|---|
| Symbol | |
|---|
| ID | 3774298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2156574 |
|---|
| End bp | 2157755 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800524 |
|---|
| Product | acetate kinase |
|---|
| Protein accession | YP_401096 |
|---|
| Protein GI | 81300888 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0282] Acetate kinase |
|---|
| TIGRFAM ID | [TIGR00016] acetate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAACTAC TAACCTTCAA TGCAGGTTCC AGTAGCTATA AATTGTCAGG ATTTGAGATC
ACAACAGCTG CGGAGCAAAC AGATCCCGTC TGGCAAGTCC AAATTGATTG GAAAACCGAT
CGAGCGGCGA CGCTGACGCA GCCCGGACAG CCTGTTCAGA TGCTGGATAG CAGCGATCGC
AGGGCTTGGC TTGAAATAGC GCTAGAGACA TTGCCCGATC GCAGCGCGAT CGCGGCGGTG
GTGCACCGGG TCGTTCACGG TGGACAGCAA CAAGCTCCCG CTGTGGTGAC GCCAGAGCTG
AAAGCGACGA TCGCCGCCGC CGCTAATTTA GCGCCCTTGC ACAATCCCCT CAATCTGGCG
GGGATCGAGC AGATGGAGCA GTTGTTTGGC CTAGCGATGC CTCAGATTGC TGTGTTTGAT
ACGGCCTTTC ATCAGCAAAT GCCAGTGGCT GCGGCCATCT ATGGCGGTCC CTATCACTGG
TGGGAGCAAG GATATCGGCG CTATGGCTTC CACGGCATCA GTCATCAATA TCTGGCGGAA
CGCTGTGCCC AGTTGAGCGA TCGCTCTCTC TCGAATTTGC AATTAGTGAC CGCGCATTTA
GGCAATGGGT GCTCGCTGGC GGCGATTCGT AATGGCCATA GTGTCGATAC CAGTATGGGC
TTTTCGCCGT TGGAAGGCCT AGTGATGGGC AGTCGGAGTG GCACAGTCGA TCCGGGCTTA
CTCCTGCATC TCTTGCAACA GCCAGATTGC AGCCCCAGTC AGCTCAGCAC GGTCCTGAAT
CAGCAATCGG GGCTTCTAGG TTTGAGTGGT CGCTCCAATG ATGTGCGGGC GTTGGCGATC
GCAGCGGACG CCGGGGATCA GCGATCGCAG TTAGCGTTAG CAGCCTTTAC CCACAGTCTG
CGGCGACATC TTGGGGCAAT GTTGGCCAGT CTGACGCGGC TTGATGCGCT GGTGTTTGCC
GGTGGGATCG GCGAAAACTA TCGGTCGCTC TGGCCAGCGG TCTGCGAACA CTTTGCGGGC
ATGCCGATTC GGCTTGATCC GGAAGCGATG GCTGTTGCAG GCGATCGCCG CATCAGTACG
CCAGATTCTG CGATCACCGT TTGGGTGATT CACAGTCGTG AGGACTGGCA GATGGTGCAG
TTGGCCCTGC CTTTGCTTCG ATCCCCACAG TCTTTCAATT GA
|
|---|
| Protein sequence | MQLLTFNAGS SSYKLSGFEI TTAAEQTDPV WQVQIDWKTD RAATLTQPGQ PVQMLDSSDR
RAWLEIALET LPDRSAIAAV VHRVVHGGQQ QAPAVVTPEL KATIAAAANL APLHNPLNLA
GIEQMEQLFG LAMPQIAVFD TAFHQQMPVA AAIYGGPYHW WEQGYRRYGF HGISHQYLAE
RCAQLSDRSL SNLQLVTAHL GNGCSLAAIR NGHSVDTSMG FSPLEGLVMG SRSGTVDPGL
LLHLLQQPDC SPSQLSTVLN QQSGLLGLSG RSNDVRALAI AADAGDQRSQ LALAAFTHSL
RRHLGAMLAS LTRLDALVFA GGIGENYRSL WPAVCEHFAG MPIRLDPEAM AVAGDRRIST
PDSAITVWVI HSREDWQMVQ LALPLLRSPQ SFN
|
|---|
| |