Gene Synpcc7942_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2077 
Symbol 
ID3774296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2155133 
End bp2155549 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID637800522 
Producthypothetical protein 
Protein accessionYP_401094 
Protein GI81300886 
COG category[S] Function unknown 
COG ID[COG3011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.949648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGCT CGATTTGGCA GTACACATTG CTCTACGACG GTGGCTGTCC ACTCTGCTTA 
CGCGAGGTTC GCTTTCTGCA AGGACGCGAT CGCCAGAACC GCATCCAGTT TGTCGATATT
GATGCACCGG ACTATGCCCC CGAGGAGCAT GCCGGGATCA GCTACGAGCA AGCCATGGGC
CGAATCCATG CCCTTCGCAA TGATGGTGTC ATTCTGCAGG ATGTGGAAGT TTTTCGGCAG
CTTTACGCCG CGATTGGCCT CGGCTGGATC TACGCCCCAA CGCGCTGGCC CCTCTTGCGA
TCGCTGATCG ATTGGGTCTA CGGGCTCTGG GCCGATCGCC GCTTAGCCCT CACAGGACGT
CCAGATTTAG CAACCCTAGC GGCCGACCGT CAATGCCGCG ATCGCTGTCA GGTCTGA
 
Protein sequence
MTGSIWQYTL LYDGGCPLCL REVRFLQGRD RQNRIQFVDI DAPDYAPEEH AGISYEQAMG 
RIHALRNDGV ILQDVEVFRQ LYAAIGLGWI YAPTRWPLLR SLIDWVYGLW ADRRLALTGR
PDLATLAADR QCRDRCQV