Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2026 |
Symbol | |
ID | 3774213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2094451 |
End bp | 2095854 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637800471 |
Product | glycosyltransferase |
Protein accession | YP_401043 |
Protein GI | 81300835 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.910937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.952991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGCC AGCGGTCTTG GATTCGTCCC TACGAGCGAC AACTGCCTTA CCTGCAGCTT GCGCTCGACT TGCTGCTGAT TGTGCTCAAT GCAGTCATCG CTTTTCGGCT GCGCTTCGAG TTCAGCTATT TCCAAGACAA CGCTCGCTAC CTGCTGCCAC TGCTGCTAGC ATTGCCCGCT GCGGCCATCT ATTTCCCGCT GTTTAACCTC TACGATTCCT GGCGCGGGCG ATCGATGATT CCACTGATGC TGCGGGTCGC CGCCGCTTGG GGTCTAACGA TCGCTACCAC CGTCACGATC ATTTTTGCCC TGCACTACGG CAGTTCCTTC TCGCGGCTCT GGTTTACGAC CTGGGCGATC GGCAGTCTCT ACAGCTTTGG ACTGATTCGC CTGCTCTGGG TGGCCGGTTT ACAGATGATG CGCCACAAGG GCTGGAACGA ACGCCGTCTC CTCATTGTCG GGGCCGGTGA CCTGGGGCAA GTACTGACCG ATCGCTTGGC GGCCGCTCGT TGGACCGGAC TGCGCGTGGT TGGGTTCCTC GACGACAACC CGGAGCTAGA GGGACAAAAC TATCGCGGCA TTCCAATCAC GGCTCAGGTT GACCAGATTG AAACTTGGAT CGATCGTTTT GACGCCCATG AAGTCTGGTT AGCCTTGCCC TTACGGGCAC AGGATCGCGT CCAAGAAATT TTGCATCTGT TGCGCCACAG CACGGTGACA ATCCGCCTAA TACCTGATGT CTTTAGCTTC CGGCTGATCA ACCACGGCTT CACAGAAGTT TTGGGCGTAC CACTCATTGA CCTCAACGCC TCACCGATGA TGGGCTCCAA TCGCTTCATC AAGGCGATCG AGGACAAGGT CTTAGCAGGC ATGATTCTGC TACTAGCGAG TCCAGTCATG CTGGCGATCG CGATCGGCAT CAGGCTGACC TCACCGGGCC CAATCTTCTA TCGCCAGGAG CGAATTGGCT GGAATGGGCA GCCGTTTATG ATGCTCAAGT TCCGGTCGAT GCCGGTGAAT TCAGAAGCAA AAGGGGTGCA GTGGGGCAAA GCCTACGCCA AGCCCACCAC ACCGCTGGGA AGTTTCCTAC GGCGCACTAG TTTGGATGAG TTGCCGCAGT TTATTAACGT CTTGCGCGGT GAGATGTCGA TCGTCGGTCC TCGTCCCGAG CGATCGCTGT TTGTCGAGCA GTTCAAGGAT GAAATCCCTG ACTACATGAA GAAACACATG GTCAAGGCAG GAATTACTGG CTGGGCACAG GTGAACGGGC TGCGCGGCGA CACGGATCTA CGCAAGCGGA TTGAGTACGA CCTCTACTAC ATTGAGAACT GGTCCCTTGC CTTTGACCTG CAGATTATTG GCATGACGCT GCTCAAAGGC TTCCTCAGTC GCAATGCGTA CTAG
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Protein sequence | MPSQRSWIRP YERQLPYLQL ALDLLLIVLN AVIAFRLRFE FSYFQDNARY LLPLLLALPA AAIYFPLFNL YDSWRGRSMI PLMLRVAAAW GLTIATTVTI IFALHYGSSF SRLWFTTWAI GSLYSFGLIR LLWVAGLQMM RHKGWNERRL LIVGAGDLGQ VLTDRLAAAR WTGLRVVGFL DDNPELEGQN YRGIPITAQV DQIETWIDRF DAHEVWLALP LRAQDRVQEI LHLLRHSTVT IRLIPDVFSF RLINHGFTEV LGVPLIDLNA SPMMGSNRFI KAIEDKVLAG MILLLASPVM LAIAIGIRLT SPGPIFYRQE RIGWNGQPFM MLKFRSMPVN SEAKGVQWGK AYAKPTTPLG SFLRRTSLDE LPQFINVLRG EMSIVGPRPE RSLFVEQFKD EIPDYMKKHM VKAGITGWAQ VNGLRGDTDL RKRIEYDLYY IENWSLAFDL QIIGMTLLKG FLSRNAY
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