Gene Synpcc7942_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2017 
Symbol 
ID3774204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2085077 
End bp2085370 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content59% 
IMG OID637800462 
Producthypothetical protein 
Protein accessionYP_401034 
Protein GI81300826 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.314161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCT TGCTGTGGTT TAGCTGGATT TTGGGCGGTG TGCTGGCTGG CATGACCCTC 
CTGTTCATTT TTCGGATTGT GTTGACTTGG TATCCCCAGG TCGATCTGCA ACAGGGGCCC
TACCGCGCGA TCGCCCTCCC CACTGAACCG TTTCTTGCTC CAACCCGTCG CTTGATCCCC
CCCCTAGGCG GCGTCGATAT TTCGCCGATC ATCTGGGTTG CGCTGATCAG CCTGCTCCGC
GAGATACTGC TGGGGCAACA GGGATTGTTG ACGATGGTGC TGCGCCAAGG CTAG
 
Protein sequence
MQPLLWFSWI LGGVLAGMTL LFIFRIVLTW YPQVDLQQGP YRAIALPTEP FLAPTRRLIP 
PLGGVDISPI IWVALISLLR EILLGQQGLL TMVLRQG