Gene Synpcc7942_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2015 
Symbol 
ID3774202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2083852 
End bp2084685 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID637800460 
Producthypothetical protein 
Protein accessionYP_401032 
Protein GI81300824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.355614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAACG CCAGTCTGAA CTGGGCCAGC ATTGTTGGCA TTGTTTTGGC AGTTGGTGGA 
GCACTTCTCT ACTTCCTGCG GACGATTCGC CCAGCTCTCG CCCGCGACTA CGACGTCTTT
TTCGCCGCGG TGGGTCTGCT CTGTGGCGGT ATTCTCTTTT TCCAAGGCTG GCGCCTCGAT
CCGATTCTGC AGTTCGGCCA ATTTTTGTTG GCTGGAACGA CGGTCTTTTT TGCCTACGAA
GCCCTACGGC TACGCGGAAT TGCGACAGAG CAAGCGAAGC GCAACACGCC GTTGATTGAC
GACGATCGCC CCGTCAGTCG CGTCTATCGC TACGAACCCG AAGATGACTA CGATCGCTTC
GAGGATCGCG CCCCTGCACC GGAACGCCGC CTGCGTGGGA GTCGCTTCCA GCGGGAAGAG
CTAGAAGAGG ATAGCTACGA TATGCCGATG CGACCGCCCC GTTCTCGCCG AGCGGAGCCT
CCAGCCTTCG AGAGTCGCGT CAGCAGCCGT CGTTCCCCAG CGCGGGATGA CTGGGATGAC
TACGGCACCC CTCTGCCAGC GACCGATCGC TTTGTCGAAG AGTATTCAGA ACCAGAGCCG
GCACCAGAGC CCGCTCGTCC TCAGCGTCGC CTAACCGGGG TTTCCGACCG CATGCCCCGT
AGCTCTCGAC GATCGCGGAC GGAAGAGTCA GCTGCTGCTA GCCGCCGCAG CCGTCCTGCT
GCCCGAGATT CTCAGCCTTC GGCTGATGAA CCCTACGTGG ACTTCCAGCC CCTCAACACC
AGCCGTAGTC CTAAGCCTGA CGAAGACGAT AACTCGAGCC AATTTGACGA CTAG
 
Protein sequence
MVNASLNWAS IVGIVLAVGG ALLYFLRTIR PALARDYDVF FAAVGLLCGG ILFFQGWRLD 
PILQFGQFLL AGTTVFFAYE ALRLRGIATE QAKRNTPLID DDRPVSRVYR YEPEDDYDRF
EDRAPAPERR LRGSRFQREE LEEDSYDMPM RPPRSRRAEP PAFESRVSSR RSPARDDWDD
YGTPLPATDR FVEEYSEPEP APEPARPQRR LTGVSDRMPR SSRRSRTEES AAASRRSRPA
ARDSQPSADE PYVDFQPLNT SRSPKPDEDD NSSQFDD