| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2013 |
|---|
| Symbol | |
|---|
| ID | 3774200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2082726 |
|---|
| End bp | 2083253 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637800458 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_401030 |
|---|
| Protein GI | 81300822 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.57132 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC GATCGCCGTG GTTACTTCGA GGGCTAGCAC TGCTCCTGAG CCTGATTTTG
ATGGGGTGTT CTGGTGCTCC GCGCTTGATA GCCTTGCCCA GCGGTGATCG CGGGGTAAAC
AGTCGCTATG CAGAGTTATT CCCGAGTCTG GGCGATCGCT CGCTACTGGT CTTTGTCTCC
GATCGCCGGG GTAGCCGGGA TGCGTATCTC TACAGTGTTG AACAGCGCCA GCAGATTCCT
TTACCTGGGC TGAATAGCCT GGATTTACTG GTCGAACATC CGGCAATTTC CGCTGATGGG
AACTGGATCG CCTTTGCTGG AAGTCGGGGC GATCGCACCA ACATCTACCT CTACGATCGC
CGCAGCCAGC AGCTCCGCAA CCTGACCGCC GATCTAGAGG CGATCGTGCG CAATCCTAGC
CTGAGTCGCG ACGGACAGCG GATTGCCTTT GAGGCAGCGC TGGGTGGTCA GTGGGACGTG
TTGGTCTATG ACCGCGATGC TGGCCCGCTC GATTTCATTC AGCCCTAG
|
|---|
| Protein sequence | MKQRSPWLLR GLALLLSLIL MGCSGAPRLI ALPSGDRGVN SRYAELFPSL GDRSLLVFVS
DRRGSRDAYL YSVEQRQQIP LPGLNSLDLL VEHPAISADG NWIAFAGSRG DRTNIYLYDR
RSQQLRNLTA DLEAIVRNPS LSRDGQRIAF EAALGGQWDV LVYDRDAGPL DFIQP
|
|---|
| |