| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1972 |
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| Symbol | |
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| ID | 3774159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2042290 |
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| End bp | 2043057 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800417 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_400989 |
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| Protein GI | 81300781 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTT CCTGGATAGT TTGGGTTCTA GTAATCTGCA TCGGATTCGG CGGGCCTGCA
CAAGCCGCAA CCCTCGATGA GCTTTACCAA TCCGCTCTAG AAGCAAGCTA TCGCGGTGAG
TTTGGGCGAG CAGAACAGCT CTGGAGTGAG GCGATCGCCC TAGCTCCTGA CAATGCGGCA
CTCTGGAGTA ATCGCGGCAA TGTTCGCGTC AGCCAAAACC ATCTCGAAGA GGCGATCGCG
GACTACAACG AATCTGTGCG GCTAGCTCCT AATGCCCCCG ACCCCTACCT GAATCGGGGC
ACGGCTTGGG AAGGGCTGCA GGAATGGGAC AAGGCGATCG CCGACTATCA GCAGGCTCTG
CAGTTCTCTC CTGGGGATGC TGCCGCCCAC AACAATTTGG GTAATGTGCG CCTGAGCTTG
GGCGAGTACG AACAAGCCCT GAGCGAGTTT GAGACGGCCA GTCGGTTGGC TCCGGGCTTT
GCCTTTGCGG GCGCCAATGT TGCTTTGACC CTGTTCCAAC TCGATCGCAC TTCCGACGCC
ATTCAGCGGA TGCGATCGCT GGTGCGCAAG TATCCCAACT TTGCTGACAT GCGGGCGGCG
CTCACGGCGG TGTTGTGGCA ACAGGGACAA CGGGGCGAAG CTGAAAGTAA CTGGGTCGCC
GTCATGGGGC TGGATACCCG CTATCGCGAT CTGGACTGGG TACGTCAAAT TCGCCGCTGG
CCACCAGCTG CAGTCACAGC CCTCGAGCAA TTCTTGGCCT TGCAGTAG
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| Protein sequence | MLRSWIVWVL VICIGFGGPA QAATLDELYQ SALEASYRGE FGRAEQLWSE AIALAPDNAA
LWSNRGNVRV SQNHLEEAIA DYNESVRLAP NAPDPYLNRG TAWEGLQEWD KAIADYQQAL
QFSPGDAAAH NNLGNVRLSL GEYEQALSEF ETASRLAPGF AFAGANVALT LFQLDRTSDA
IQRMRSLVRK YPNFADMRAA LTAVLWQQGQ RGEAESNWVA VMGLDTRYRD LDWVRQIRRW
PPAAVTALEQ FLALQ
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