| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1965 |
|---|
| Symbol | |
|---|
| ID | 3774150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2035730 |
|---|
| End bp | 2037379 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637800408 |
|---|
| Product | exopolyphosphatase |
|---|
| Protein accession | YP_400982 |
|---|
| Protein GI | 81300774 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.363541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG AGATTGCGCC CCACGCCCGT CCAGCACTCC CCAGTGAGCT CGGGCCAGAA
CCGATTTTGG CAGCAATCGA TGTGGGCACA AACTCCATTC ACATGGTGGT GGTCCAGATT
CGTCCCGACC TGCCGGCCTT CGATATCGTC GGCACCGAGA AAGCCACCGT CCGACTGGGC
GATCGCGATC CTGCCACGGG TGAGTTGACC GAGGCGGCGA TGGAACGGGC ACTCCAAGCG
CTGCAACGCT GTCGAGCGAT CGCGGCGGCT CGGGGGGCCA CGCAAATTGT GGCTGTCGCC
ACCAGTGCTG TGCGAGAGGC TCCCAATGGT CGCCAATTTC TCGAGCGGGT CATCCATGAA
GTCGGTTTAG AAGTCGATCT GATCTCGGGG CCAGAGGAAG CACGACGCAT CTACCTTGGG
GTGCTGTCCG GCATGGATTT TCAGCAGCGA CACCACGCCA TCATTGATAT TGGCGGTGGA
TCGACCGAGC TGATTCTGGG AGCGGGGCAA GAGCCGCTCT GCCTGACCAG CACGAAGGTT
GGCGCCGTCC GTCTCACCCA AGAATTCATT CACACCGACC CAATTAGCCC CAGCGAGTAC
ACCGTGCTGC AAGCCTACGT GCGCGGCATG GTCGAACGGG CGGTCGATGA AGTCAAAGCC
GCTCTACCAC CCAACACGCC CCTACGACTG ATCGGCACTT CCGGCACCAT TCAAGCCCTC
GCCGCCCTCC ATGCCCACCA AAGCCAAGGC AGCTTGCCGA CCACCTTCAA TGGCTACAGC
TTAGCTCTTG GCGATCTGCA GCAGTTGGTG CAGCAGTTGC GGCGTATGCC CTTTGCCGAA
CGTCAGACTT TGCCCGAGCT GTCGGAACGA CGAGCTGAGA TTATCGTTGC AGGGGCGATC
GTGCTGCAGG AAACCATGCA GCTGTTGGGT TGCGATCGCG TCACCATCTG CGAACGGGCC
TTGCGCGAGG GGCTGATCGT CGACTGGATG CTCAGCCACG GACTGATCGA AGACAAGCTG
CGCTATCAGG GATCGGTGCG GCAGCGCAGT GTCTACAACC AAGCGCGCAA ATTTCGGGTA
GATGTCAGTC ACGGCGAGCA AGTGGCGCAA TTAGCCCTCA GCCTGTTTGA CCAACTGCGC
GGACAACTAC ACCAATGGGG CGAGAGCGAA CGGGAACTCC TTTGGGCAGC CGCCATCCTG
CACAATTGCG GCCATCACAT CGACCACTCC TCCCATCACA AGCATTCCTA TTACCTGATC
CGCCACGGGG GTCTGCTGGG CTACAACGAG ACGGAGATTG AACTGATTGC TAATCTGGCT
CGCTATCACC GCAAGAGCCT GCCCAAGAAA AAGCACGAAA ACTTCCGCAC CCTGCCCACC
AAGGAGCAAC GGCGCTTGGT AGAACAACTC AGCGCGATTC TGCGGGCGGC AGTTGCCCTC
GATCGCCGGC AGGTAGGAGC GATCGCGAGT CTTCATTGCC GCTACCTTGC TCCGCAACGG
CAGCTTCTTC TTCAACTGCA TCCGGCTCGA ACCAGTGAGG ACTGCGCCCT CGAACTCTGG
AGTTTTGACT ACAACCGCCA TGCTTTAGAA GCCGCGTTTG CAATCAATGT CGCCGCAGAA
CTGGTGCCGC AGCCGCTCAG CGCAGTCTAG
|
|---|
| Protein sequence | MSTEIAPHAR PALPSELGPE PILAAIDVGT NSIHMVVVQI RPDLPAFDIV GTEKATVRLG
DRDPATGELT EAAMERALQA LQRCRAIAAA RGATQIVAVA TSAVREAPNG RQFLERVIHE
VGLEVDLISG PEEARRIYLG VLSGMDFQQR HHAIIDIGGG STELILGAGQ EPLCLTSTKV
GAVRLTQEFI HTDPISPSEY TVLQAYVRGM VERAVDEVKA ALPPNTPLRL IGTSGTIQAL
AALHAHQSQG SLPTTFNGYS LALGDLQQLV QQLRRMPFAE RQTLPELSER RAEIIVAGAI
VLQETMQLLG CDRVTICERA LREGLIVDWM LSHGLIEDKL RYQGSVRQRS VYNQARKFRV
DVSHGEQVAQ LALSLFDQLR GQLHQWGESE RELLWAAAIL HNCGHHIDHS SHHKHSYYLI
RHGGLLGYNE TEIELIANLA RYHRKSLPKK KHENFRTLPT KEQRRLVEQL SAILRAAVAL
DRRQVGAIAS LHCRYLAPQR QLLLQLHPAR TSEDCALELW SFDYNRHALE AAFAINVAAE
LVPQPLSAV
|
|---|
| |