Gene Synpcc7942_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1956 
Symbol 
ID3774141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2028196 
End bp2029113 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content57% 
IMG OID637800399 
Productacetyl-CoA carboxylase subunit beta 
Protein accessionYP_400973 
Protein GI81300765 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCT TGGACTGGTT TGCCAATCGC CGTAAGACCG AACCCGTCGT TCACGACTAT 
CAAGAGCGCG AAATTGCCGA TGGTCTCTGG ACGAAGTGTG AGTCCTGCGA CGCTCTGACT
TACACCAAGG ATTTGCAGGC CAATTTGATG GTCTGTTTGC AGTGTGGTCA TCACCTGCGC
ATCTACAGCG ATGAGCGCAT TCGCCAGTTG ATCGACCCCG GCACTTGGCA GTTTTTGGAT
GAAGCAGTTT CGCCCACCGA TCCGCTCGGT TTCCGCGATC GCAAGTCCTA TAGCGATCGC
CTAAAGGAAA CCCAAGCCAA CACGGGTCTG AGTGATGCGG TTCGCACTGG CGTCGGCTTG
CTCGAAGGTC AGCCGGTCGC GCTGGGTGTG ATGGACTTTC GCTTCATGGG CGGCAGCATG
GGTTCTGTCG TCGGCGAAAA ACTGACTCGC TTGATCGAAA AAGGCACCGA GCAGCGATCG
CCCGTGATCA TCGTCTGTGC TTCCGGTGGG GCACGGATGC AAGAAGGCAT GCTCAGCCTA
ATGCAGATGG CCAAAATTTC GGGCGCACTG GAACGGCACC GCGAAGCCGG TTTGCTCTAT
CTGCCGATTT TGACCCACCC GACTACCGGC GGTGTCACAG CCAGCTTTGC CATGTTGGGA
GACTTGATCA TCGCGGAACC CAAGGCACTC ATTGGCTTTG CGGGACGGCG CGTGATTGAG
CAAACCCTGC GCGAAAAGCT ACCCGACGAC TTCCAAACGG CGGAATATCT GCAGGCCCAC
GGCTTCGTCG ACACGATTGT GCCACGTACG CAATTGAAGA AGACCTTGGC GCAACTCATT
CGTCTGCACC AGCCGCAATC GCCTGAAATG AAGCTGCCCC TGCTCGAATC CTCTAGTCCT
GCCACCGCAC CCCTCTAG
 
Protein sequence
MSLLDWFANR RKTEPVVHDY QEREIADGLW TKCESCDALT YTKDLQANLM VCLQCGHHLR 
IYSDERIRQL IDPGTWQFLD EAVSPTDPLG FRDRKSYSDR LKETQANTGL SDAVRTGVGL
LEGQPVALGV MDFRFMGGSM GSVVGEKLTR LIEKGTEQRS PVIIVCASGG ARMQEGMLSL
MQMAKISGAL ERHREAGLLY LPILTHPTTG GVTASFAMLG DLIIAEPKAL IGFAGRRVIE
QTLREKLPDD FQTAEYLQAH GFVDTIVPRT QLKKTLAQLI RLHQPQSPEM KLPLLESSSP
ATAPL