Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1920 |
Symbol | leuS |
ID | 3775283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1995596 |
End bp | 1998193 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800362 |
Product | leucyl-tRNA synthetase |
Protein accession | YP_400937 |
Protein GI | 81300729 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0495] Leucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAATG GTGCCAATTC ACGCTCGCAA GAATACCAAG GAGTTTCGGT GGACAGCCGC TACGATCCCC AGGCAATTGA AACGAAGTGG CAACAGTCCT GGGCCGCTGC GCAGCTCGAT CGCACTCCCG AAGCGGACGA TCGCCCCAAG TTTTATGCCC TGTCGATGTT CCCCTATCCT TCGGGGAACT TGCACATGGG CCATGTGCGC AACTACACCA TCACAGATGC GATCGCGCGG GTCAAACGCC GGCAAGGCTT CCGAGTGCTG CATCCGATGG GTTGGGATGC CTTCGGTCTA CCCGCTGAGA ATGCAGCGAT CGATCGCGGT GTTCAACCCG CCGATTGGAC TTATCAGAAT GTCGCGCAGA TGCGCGAGCA ACTGAAGCAG TTGGGATTGT CCTACGACTG GGATCGCGAG GTCACGACTT GCTCGCCGGA CTACTACCGC TGGACGCAAT GGTTGTTCCT GCAGTTTTTT GAGGCGGGGC TGGCCTATCA GAAGGAAGCC ACGGTTAACT GGGACCCGAT TGATCAGACT GTGTTGGCGA ATGAGCAGGT CGATAGTGAG GGGCGATCGT GGCGATCGGG TGCCAAAGTG GAGCGCCGCC AGCTCAAGCA ATGGTTCCTG AAAATCACGG ACTACGCCGA GGAGCTGCTG CAAGACCTCG ATCAGCTGAC TGGCTGGCCG GAGCGCGTGC GCTTGATGCA GGCCAACTGG ATTGGGAAGT CCACCGGTGC CTATCTGGAA TTTCCGATCG TCAATTCCAG CGATCGCGTC AAAGTCTTTA CGACCCGTCC CGATACGGTC TACGGCGTCA GCTACGTGGT GCTGGCGCCG GAACATCCGT TGGTGACACA GGTAACGACG CCAGAACAGC AAACTGCAGT GGCAGCCTTT GCAGCGGAAG TCAGCCAAAC CAGCGAACTA GAGCGGACAG CAGAAGATCG CCCCAAACGC GGCGTGCCCA CGGGCGGCTT CGTCACTAAT CCGTTTACGG GCCAGGCGGT GCCGATCTGG ATTGCCGACT ACGTTTTGGT TGAGTACGGC ACGGGTGCCG TAATGGGTGT TCCTGCCCAC GACAGTCGCG ACTTTGCCTT CGCCCAGCGG TATGGCCTGC CAGTGCAGCC GGTGATTCAA CCGACAGAAG GCGCGATCGC GGAACCTTGG CCGGCTCCCT TCACTGAAGC GGGTGTGATG GTCAACTCCG GCCAGTTCGA TGGTCTGTCT TCAACTGAAG CGAAAGCCAA GATCATCGCC TTTGCCGAAG AACAAGGCTG GGGCCAAGCC CATGTGCAAT ATCGCCTGCG TGATTGGCTG ATCTCCCGTC AGCGCTACTG GGGCTGCCCG ATTCCGATTG TCCATTGCCC CGACTGCGGC CCTGTGGCAG CAGCCGATCT GCCGGTGCAG CTCCCTGACT CGGTGCAGTT TAGCGGGCGT GGCCCTTCGC CACTAGCGCA ACTGGAAGAT TGGGTGACGA CCACTTGCCC AAGTTGTGGC AAACCAGCGC GGCGCGAAAC CGACACGATG GACACCTTCA TGTGTTCGTC TTGGTACTAC CTTCGCTACA GCGACGCCAG CAATCCAGAA ATTGCCTTCA CCAAGGACAA GGTCAACGAC TGGTTGCCGG TGGATCAGTA CGTTGGCGGC ATTGAGCATG CAATTCTGCA CCTGCTCTAC TCGCGCTTCT TCACTAAAGT GCTGCGCGAT CGCGGCCTCC TCAGCTTCGA TGAGCCATTT AAGCGGCTGC TGACCCAAGG GATGGTGCAG GGGTTGACCT ACAAAAATCC CAAGACCGGT AAGTACGTGC CCAGCGATCG CATTAGCGAT CCCAGTCAGC CGGTCGATCC TGATACAGGC GATCGCCTCG AAGTTTTCTT CGAGAAAATG TCGAAGTCGA AGTACAACGG CGTCGATCCA GCCCGAGTCC TCGATCGCTA TGGCGCCGAT ACGGCGCGAA TGTTCATCCT CTTCAAAGCG CCGCCCGAGA AGGATTTGGA GTGGGATGAT GCCGATGTTG AAGGTCAATT CCGCTTCTTA AACCGGGTTT GGCGTCTGGT GCAAACAGCC AGCCAAGTCG AAGCAACGAC CGCAGCAGAC GATAAGGCCG AAAAGGATCT GCGCCGCGCT GTGCATACGG CGATCCAAGC GGTCACTGAG GATCTGGAAG AAGATTATCA GCTCAATACG GCGATTGCGG AGCTGATGAA GCTGACCAAT GCACTTAACG ATGCACCCAT GCCTGGGAGT CCGGCCTATC TGGAAGGCGT GCAGACATTA GTACTACTGC TGGCACCCTT TGCCCCTCAC ATTGCCGAGG AACTTTGGCA GCAGCTGGGT GGCGAGCGAT CGGTGCACCT TGAAGGCTGG CCCGTCTTGG ATGAATCGGC ACTCATCGTC GATGAAATTC CTTTGGTGAT TCAAATTATG GGTAAAACGC GGGGCACAAT CACCGTACCT GCCTCTGCCG ACCGCGATCA GCTCCAACAG TTGGCAGAGA ATTCTGAGAT TGCCCAACGC TGGCTGGACG GTCAAACAAT CCGCAAAGTG ATCGTTGTTC CAGGCAAGTT GGTCAATTTT GTAATCGCTT CACCCTAA
|
Protein sequence | MQNGANSRSQ EYQGVSVDSR YDPQAIETKW QQSWAAAQLD RTPEADDRPK FYALSMFPYP SGNLHMGHVR NYTITDAIAR VKRRQGFRVL HPMGWDAFGL PAENAAIDRG VQPADWTYQN VAQMREQLKQ LGLSYDWDRE VTTCSPDYYR WTQWLFLQFF EAGLAYQKEA TVNWDPIDQT VLANEQVDSE GRSWRSGAKV ERRQLKQWFL KITDYAEELL QDLDQLTGWP ERVRLMQANW IGKSTGAYLE FPIVNSSDRV KVFTTRPDTV YGVSYVVLAP EHPLVTQVTT PEQQTAVAAF AAEVSQTSEL ERTAEDRPKR GVPTGGFVTN PFTGQAVPIW IADYVLVEYG TGAVMGVPAH DSRDFAFAQR YGLPVQPVIQ PTEGAIAEPW PAPFTEAGVM VNSGQFDGLS STEAKAKIIA FAEEQGWGQA HVQYRLRDWL ISRQRYWGCP IPIVHCPDCG PVAAADLPVQ LPDSVQFSGR GPSPLAQLED WVTTTCPSCG KPARRETDTM DTFMCSSWYY LRYSDASNPE IAFTKDKVND WLPVDQYVGG IEHAILHLLY SRFFTKVLRD RGLLSFDEPF KRLLTQGMVQ GLTYKNPKTG KYVPSDRISD PSQPVDPDTG DRLEVFFEKM SKSKYNGVDP ARVLDRYGAD TARMFILFKA PPEKDLEWDD ADVEGQFRFL NRVWRLVQTA SQVEATTAAD DKAEKDLRRA VHTAIQAVTE DLEEDYQLNT AIAELMKLTN ALNDAPMPGS PAYLEGVQTL VLLLAPFAPH IAEELWQQLG GERSVHLEGW PVLDESALIV DEIPLVIQIM GKTRGTITVP ASADRDQLQQ LAENSEIAQR WLDGQTIRKV IVVPGKLVNF VIASP
|
| |