Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1901 |
Symbol | |
ID | 3775264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1973458 |
End bp | 1975839 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637800342 |
Product | putative glycosyltransferase |
Protein accession | YP_400918 |
Protein GI | 81300710 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0537767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.403992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTG GCATTATTGC TCCCAGCTCT GTCCCCTTCT GCATTGGTGG AGCTGAAAAA TTTTGGTGGG GATTACAACG AGCCTTTAAT GATCTAACAC CTCACGCAGC TGAATTAATT AAGCTACCAT CGCCTGAAAA TAATATCTAC GACTTAATTC AAAGTTATCA ACGGTTTTCA CGATTTAATC TGAATCATTT TGACCTGCTA ATAAGTAGCA AATATCCTGC TTGGATGGTT AATCATCCCC GCCATCTTTG CTATCTTCAA CATCGTCTTC GTGGCCTTTA TGATACTGAT AATGGTCATC AAGGAAATTT GAACTTAGCT CGCTATTCTC AACTCCAAAA AATTGAGAAA ATCCTTGAAA AAAATGGCGA TCGCTCCCAG CTAGAGCTTT TATTCTCTGA ATTGAACGAT TTCTTGAAAA ATGAGCCTAG TGATTCTAAG CTTTTAGAGT TCCCTGGACA ATTGATTCGG AAAGTTATTC ACTTTTGCGA TCGCATTGCC TTGAGCCCTA CTGAGATTGC TGGTTACGCT GCGATTTCCC AAAATGTTGC CCAGCGCAAA AACTACTTTC CTGATTCGGT ACGTCCGAAA GTAATTTATC ATCCCTCTGA TTTAGAAAAA TTCTATTGTG ATAAACAAGA TTACTTTTTT ACTATTAGTC GTTTAGATAA CGCCAAGCGA GTCAGTTTGC TGATTTCTGC AATGCAGCAA GCTAAAACAG ATATTCCATT ACTGATTGCA GGGACTGGAC CTGAATCAGA GAGTCTTAAA AAACAAGCTG GAAATGATTC CCGAGTTCGA TTCTTAGGTT TTGTGAAAGA TCGAGAGGTA ATTGATCTCT ATGCCAATGC TTTAGCTGTC CTTTATGTTC CCTATGACGA AGATTATGGG CTAGTTCCTA TTGAAGCCTT TCGCTCTGGT AAGCCTGTTA TTACAGTTAC GGATGCTGGT GGCCCTTTAG AGTTTGTTCA AAACTTGACA ACGGGTTGGG TCGTGCCTCC AAAACCTGCA GCGATCGCTC AAGCAATTGA TGACTGCAGC CAGAACCCTA GTCGTGCAGC GGAGTATGGC AAGGCGGGGC AAGCGATCGC AGAAACGATT ACATGGGAAA AGACTGTTCA AGAACTGCTA GATCTAGTCG AACCCAAATT ACAGCCTGCT ACACCGCGAC GATCGCAGCT TGTAATTGGA TCAACCTTCC CTGTTACCCC ACCCCGGAGT GGCGGGCAAA GCCGAATTTT TAATCTTTAT CGAGCACTCA GTCATGAATT TGAGGTTGAA TTGATCAGCC TTGGCCCAGT TAATAGTGAG CCCAAAACCT ATCAAATCAA TCCAAACTTC TGTGAAGTTG TTATTCCTAA ATCACCGATC CATCAAAAAC TAGAAAGTCG GCTCGAGCGT CAAGCTGGTA TTTCAATTGG AGATCTCGCT GCAACTTTTT ATGGCGATCG CACACCGCAA CTGCTTGAAG TGATTGAGCA GCGACGATCG CAGGCTGATG TTCTGATTGC TTCTCATCCT TACTTACTGC CTTGGCTACA GCCCAATTCC AGGGCTAATA AATTAGTCTA TGAAGCACAC AACTGTGAGT TTGACCTCAA GCGGGGTCTG TTTCCCCAAA ACCGTAAAGG AACGAATTTA ACCCAAGAAG TACTAAAGCT GGAAGAAAAT GCTTGTCAAC AAGCTGATCT GATTGTGGCT TGTCTAGAGG CTGATTGGGA GCGGCTCTGC CATCTGTATC ACTGCCAAAA GACACCTTAT GTTTTAGTTC CTAACGGAGT TAACTGCCAA GAAGTTACTT TTGTTGATTC CGCCCTGCGA TCGCAGTGGA AACAAAAGAT TGGTTATTCA TCCTTTATTT TTCTATTTAT CGGAAGTTGG CATCAACCGA ATGTCGAAGC TGCCCACAGC ATTGTCAGTT GGGCTATCGA CTTCCCCGAG CAACAGTTTT TAATTGTGGG TAGTGTTGGC CACGCGATTG AGCAAGAGTT TAGACGAATT CCTCCTAATA TTCATTGCTT GGGTGAAGTG GATGCACGGA CTAAGCAAGT GGCTCTTAAT GTCGCTGATG TAGCACTGAA TCCTATGACG TCTGGTTCCG GTTCTAACCT AAAAGTAGTG GAATATTTAG CCGGTGGCTT ACCGCTCATT ACTACTGAGT TTGGAGTTCG AGCATTGCCT TTAGAACTGC AGGAACAGTG TCAGATTGGT GCTTTGAATG AGTTTCCAAT GCTGATGCAA AAAGCGATTG ATCAACCAGA CTTACACGAT CCTATCGCCC GCAGAAATGC TCGCTATATC GTTGAGCAAA AACTTGATTG GCGAGCGATC GCCAAGGACT ACGCGATCGC CCTCAAAGAA TTGTTGAAAT AA
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Protein sequence | MQIGIIAPSS VPFCIGGAEK FWWGLQRAFN DLTPHAAELI KLPSPENNIY DLIQSYQRFS RFNLNHFDLL ISSKYPAWMV NHPRHLCYLQ HRLRGLYDTD NGHQGNLNLA RYSQLQKIEK ILEKNGDRSQ LELLFSELND FLKNEPSDSK LLEFPGQLIR KVIHFCDRIA LSPTEIAGYA AISQNVAQRK NYFPDSVRPK VIYHPSDLEK FYCDKQDYFF TISRLDNAKR VSLLISAMQQ AKTDIPLLIA GTGPESESLK KQAGNDSRVR FLGFVKDREV IDLYANALAV LYVPYDEDYG LVPIEAFRSG KPVITVTDAG GPLEFVQNLT TGWVVPPKPA AIAQAIDDCS QNPSRAAEYG KAGQAIAETI TWEKTVQELL DLVEPKLQPA TPRRSQLVIG STFPVTPPRS GGQSRIFNLY RALSHEFEVE LISLGPVNSE PKTYQINPNF CEVVIPKSPI HQKLESRLER QAGISIGDLA ATFYGDRTPQ LLEVIEQRRS QADVLIASHP YLLPWLQPNS RANKLVYEAH NCEFDLKRGL FPQNRKGTNL TQEVLKLEEN ACQQADLIVA CLEADWERLC HLYHCQKTPY VLVPNGVNCQ EVTFVDSALR SQWKQKIGYS SFIFLFIGSW HQPNVEAAHS IVSWAIDFPE QQFLIVGSVG HAIEQEFRRI PPNIHCLGEV DARTKQVALN VADVALNPMT SGSGSNLKVV EYLAGGLPLI TTEFGVRALP LELQEQCQIG ALNEFPMLMQ KAIDQPDLHD PIARRNARYI VEQKLDWRAI AKDYAIALKE LLK
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