Gene Synpcc7942_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1884 
Symbol 
ID3775247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1956126 
End bp1956647 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content61% 
IMG OID637800325 
Productbifunctional ADP-heptose synthase 
Protein accessionYP_400901 
Protein GI81300693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG TTTACACTCT CGCGGAACTG CAAGCAGCGA TCGCGGCGGA GCCCGATCGC 
TGGCGACCGC TGGTGCTGAC CAACGGCTGC TTCGATCTGC TCCATGCCGG CCATGTGCGC
TATCTGCAGG CAGCCCGGAA CTTGGGGCGA TCCTTGGTAA TCGGCCTCAA CAGTGATGCT
TCGGTACGGG GCATCAAACC CCAACCCGAG GGGCAACCGC CCCGCCCGAT CGTGCCGGAA
CAGGAGCGGG CCGAAGTCCT AGCCGCCTTG GGTGCCGTCG ATGCCGTTGT CCTATTCAAT
GAGCCGACTG CGACGGAATT GATTCAGGCC TTGCAGCCCG AAATCTACGC CAAAGGGGGA
GACTATAGAA TTGAGTCGCT ACCCGAAGCG CCTGCAGTCC AGAGCTATGG CGGTGCCATT
CAACTGATTG CTGTTGAAGT CCCCAGCTCC ACGTCTGCCT TGATTGCGCG AATTCGGGGC
GAGTCGGCTG ATTCGCTGAT CAAATCCAGT ACCTCGCGCT GA
 
Protein sequence
MSAVYTLAEL QAAIAAEPDR WRPLVLTNGC FDLLHAGHVR YLQAARNLGR SLVIGLNSDA 
SVRGIKPQPE GQPPRPIVPE QERAEVLAAL GAVDAVVLFN EPTATELIQA LQPEIYAKGG
DYRIESLPEA PAVQSYGGAI QLIAVEVPSS TSALIARIRG ESADSLIKSS TSR