Gene Synpcc7942_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1848 
Symbol 
ID3774423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand- 
Start bp1914772 
End bp1915836 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content57% 
IMG OID637800289 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_400865 
Protein GI81300657 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.301002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTG GGGTTAGGAG GTTGTCATTG TCACAGGGCT ATCGCGTTGC AATTCTTGGA 
GCGACCGGTG CAGTTGGCAC TGAGCTACTG CAGATCCTAG AAGAGCGTCA GTTTCCGATC 
GCTGAGTTAC GGCTGTTAGC TTCCCCTCGT TCTGCGGGCC AAACCCTGAC TTTTGCAGGA 
GAAACGCTGA CGATCCAAGA AGCGACTCCC AGCGCCTTCC AAGGTCTTGA TATCGTCTTA 
GCCTCCGCGG GGGGCAGCAC CTCCAAAGCG TTGGCAGAAG CGATCGTGGC TGCGGGTGCT 
GTCATGATCG ATAACTCCAG CGCCTTTCGG ATGGATCCGA CAGTCCCCTT AGTAGTGCCT 
GAGGTCAATC CAGAAGCCGC AGCCCAGCAC CAAGGCATCA TCGCTAACCC TAACTGCACG 
ACAATTTTGA TGGCGATCGC GCTGTGGCCG TTGCAGCAGC GCCATCCGAT CCGCCGGATT 
GTGGTCTCCA CCTACCAATC GGCTAGTGGT GCTGGGGCGC GGGCGATGGC AGAAGTCCAA 
GAGCAAAGCC GAGCCATTCT TGCCGGTCAA CCCGCGATCG CTGAAATCCT GCCCTATCCC 
TTGGCTTTCA ACCTCTTCCC CCACAACTCG CCTCTGACTG AGTCGGGCTA CTGCGAAGAA 
GAGCTGAAGA TGCTCAACGA AAGTCGTAAG ATTTTTGGCC TGCCCGACCT TAAGCTGACG 
GCTACCTGTG TGCGAGTGCC TGTGCTGCGT GCTCACTCAG AAGCCATTAA CGTCGAATTC 
ACGGAGCCGT TCTCGGTGGC TGAAGCCCGG GAAGCGATCG CAGCTGCTCC TGGGGCGAGA 
CTGCTAGAAG ACTGGGACCG CAACTACTTC CCGATGCCGA TTGAAGCCAG CGGCGAGGAT 
GACGTCTTAG TCGGACGTAT CCGTCAGGAT CTGTCGGAAC CAAACGCCTT GGAATTGTGG 
ATCTGTGGCG ATCAGATTCG CAAAGGTGCA GCTCTCAATG CAGTGCAGAT TGCCGAACTA 
CTGGTGAAAC GCCAGTGGCT GCGATCGCCG GCTCTGACTC ACTAA
 
Protein sequence
MLFGVRRLSL SQGYRVAILG ATGAVGTELL QILEERQFPI AELRLLASPR SAGQTLTFAG 
ETLTIQEATP SAFQGLDIVL ASAGGSTSKA LAEAIVAAGA VMIDNSSAFR MDPTVPLVVP 
EVNPEAAAQH QGIIANPNCT TILMAIALWP LQQRHPIRRI VVSTYQSASG AGARAMAEVQ 
EQSRAILAGQ PAIAEILPYP LAFNLFPHNS PLTESGYCEE ELKMLNESRK IFGLPDLKLT 
ATCVRVPVLR AHSEAINVEF TEPFSVAEAR EAIAAAPGAR LLEDWDRNYF PMPIEASGED 
DVLVGRIRQD LSEPNALELW ICGDQIRKGA ALNAVQIAEL LVKRQWLRSP ALTH