Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1840 |
Symbol | |
ID | 3774415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1906920 |
End bp | 1907426 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800281 |
Product | hypothetical protein |
Protein accession | YP_400857 |
Protein GI | 81300649 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0702496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGTGT GGCAACGCTG GGTCAAAGGA TTGGTACTCG CGATCGCGAT CGCATTGGTT GTGGCGCCGA CTGCTGCTTG GGCAGCCAGT TCCGCAGCGA TTCGTGCCTT TGATGATGCG GAGGTCACCC GCCAAGACTA TTCCGGCCAA AGCCTGATTC AAGCGGAATT TGCCAGCGTC CGGCTCAAGG GCGTCAGCTT CCGAGGCGCT GATTTGCGCG GCGCAGTTTT CAATGGCGTC GATCTGCGTG AGGCCAACTT TGAAGATGCG GATTTCACCG ACGGCATCGC CTACGTCAGC GATCTGCGCA ATGTCAATTT CCGCAATGCC AATCTCACCT CGGCCATGTT GCTGCAATCA GAACTGCAAG GCTCTGATGT GACCGGTGCT GATTTCAGCT TTGCGGTGCT CAGCAAGCAA CAAATTACAG CGCTCTGTGA AACTGCCAGC GGCACTAACC CCAAAACGGG CGCGGATACC CGTGAGTCGC TCGGCTGCCC CGACTAA
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Protein sequence | MKVWQRWVKG LVLAIAIALV VAPTAAWAAS SAAIRAFDDA EVTRQDYSGQ SLIQAEFASV RLKGVSFRGA DLRGAVFNGV DLREANFEDA DFTDGIAYVS DLRNVNFRNA NLTSAMLLQS ELQGSDVTGA DFSFAVLSKQ QITALCETAS GTNPKTGADT RESLGCPD
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