Gene Synpcc7942_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1819 
Symbol 
ID3774394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1892346 
End bp1892930 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content53% 
IMG OID637800260 
Producthypothetical protein 
Protein accessionYP_400836 
Protein GI81300628 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.760662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.208033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCGA TCACCCCGCC TTCCTCGATA TTGCTGAGCA CCATGACTGA GCGGCGTTTG 
ATTCTCTTCA TTGCAACCAG TTTGGATGGC TACATTGCGC GTCGCAATGA GGGCATCGAT
TGGCTGTTTG ACGATGCAGA CTATGGCTAC AGCGAGTTTT ATAGCCAAAT CGACACAGTA
TTGATGGGTC GCAAGACCTA CGAACTCTCC ATGAGCCTGA GTGACGACCC CTATCCAGGC
TGCCAAATCT ATGTTTTTTC GCGATCGCTA ACGGAAACAG CAGATCCAGC CATAACGGTT
GTACAGGGTA ATCCAGCCCT TTGGGTCAGC CAGCTGAAGC AGCAACCGGG TCGAAACTTC
TGGCTCGTCG GCGGCGGTCA GCTAGTGCAG CAATGTTTAG CAGCCGATTG TCTCGATGAA
CTGATCCTCT CGATTCATCC CATCTTGCTC GGCAACGGTA TTCCTCTCTT TCCAAGTCCA
TTCCCAGAAC AGCGCTGGCA GCTGGTCAAA ACACAGTCCT ATCCCACGGG CTTGCTGCAA
TGCACCTATC ATCGCGATCG CTCAGTCCCC TCAACCGAAC CCTAA
 
Protein sequence
MGAITPPSSI LLSTMTERRL ILFIATSLDG YIARRNEGID WLFDDADYGY SEFYSQIDTV 
LMGRKTYELS MSLSDDPYPG CQIYVFSRSL TETADPAITV VQGNPALWVS QLKQQPGRNF
WLVGGGQLVQ QCLAADCLDE LILSIHPILL GNGIPLFPSP FPEQRWQLVK TQSYPTGLLQ
CTYHRDRSVP STEP