Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1819 |
Symbol | |
ID | 3774394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1892346 |
End bp | 1892930 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637800260 |
Product | hypothetical protein |
Protein accession | YP_400836 |
Protein GI | 81300628 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.760662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.208033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCGA TCACCCCGCC TTCCTCGATA TTGCTGAGCA CCATGACTGA GCGGCGTTTG ATTCTCTTCA TTGCAACCAG TTTGGATGGC TACATTGCGC GTCGCAATGA GGGCATCGAT TGGCTGTTTG ACGATGCAGA CTATGGCTAC AGCGAGTTTT ATAGCCAAAT CGACACAGTA TTGATGGGTC GCAAGACCTA CGAACTCTCC ATGAGCCTGA GTGACGACCC CTATCCAGGC TGCCAAATCT ATGTTTTTTC GCGATCGCTA ACGGAAACAG CAGATCCAGC CATAACGGTT GTACAGGGTA ATCCAGCCCT TTGGGTCAGC CAGCTGAAGC AGCAACCGGG TCGAAACTTC TGGCTCGTCG GCGGCGGTCA GCTAGTGCAG CAATGTTTAG CAGCCGATTG TCTCGATGAA CTGATCCTCT CGATTCATCC CATCTTGCTC GGCAACGGTA TTCCTCTCTT TCCAAGTCCA TTCCCAGAAC AGCGCTGGCA GCTGGTCAAA ACACAGTCCT ATCCCACGGG CTTGCTGCAA TGCACCTATC ATCGCGATCG CTCAGTCCCC TCAACCGAAC CCTAA
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Protein sequence | MGAITPPSSI LLSTMTERRL ILFIATSLDG YIARRNEGID WLFDDADYGY SEFYSQIDTV LMGRKTYELS MSLSDDPYPG CQIYVFSRSL TETADPAITV VQGNPALWVS QLKQQPGRNF WLVGGGQLVQ QCLAADCLDE LILSIHPILL GNGIPLFPSP FPEQRWQLVK TQSYPTGLLQ CTYHRDRSVP STEP
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