Gene Synpcc7942_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1813 
Symbol 
ID3774388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1884434 
End bp1886350 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content47% 
IMG OID637800254 
Productheat shock protein 90 
Protein accessionYP_400830 
Protein GI81300622 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.138988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.331097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTC TAGAGCAAGG CAATATCACG ATTCATACCG ATAACATTTT CCCGATTATC 
AAAAAGTCGC TCTACTCAGA GCATGAAATC TTTTTGCGGG AACTGATTTC TAATGCAGTG
GATGCCATTC AAAAGCTGAA GATGGTGTCC TATGCCGGTG AATTAGAGGG TGAAATCGGT
GACCCCCAAA TCACACTGAG TATCGATCGC GATCGCAAAC AACTCAAAAT TGCCGATAAC
GGTATTGGGA TGACAGCCGA TGAGATTAAG CGTTATATCA ATCAAGTTGC CTTTTCAAGT
GCAGAGGACT TTATTGAAAA ATATAAAGGC GGAGCTGATC AGCCTATCAT TGGTCACTTT
GGTCTAGGCT TCTACTCAGC TTTTATTGTT GCTGATCGGG TGGAAATTGA AACCCTCTCC
TATCAAAAAG GAGCGACACC TGTTCATTGG ACTTGTGATG GATCTCCAAG CTTTGAACTG
TCAGAGGGGA GCCGTACGGA GCGAGGAACA ACGATTATTC TTAATCTTAG TGAGGAGGAG
TTAGAGTACT TAGAACCTGC TCGTATTCGT CAGCTTGTTA AGACCTATTG TGACTTCATG
CCCGTTCCGA TCGCTTTAGA GGGAGAAGTC TTAAACAAGC AAAAAGCAAT TTGGCGAGAA
TCAGCTGGCA ATCTCAAAGA AGAAGACTAC CAAGAGTTTT ATCGCTACCT GTATCCATTT
CAAGATGAAC CATTGTTATG GGTTCATCTC AACACAGATT ACCCCTATCA AGTGAATGGT
GTTCTCTATT TCCCGAAATT GCGGCCCGAT ATTGATCTAA CTCAAGGACA AATTAAACTA
TTCTGCAATC AAGTCTTTGT CAGCGATCAC TGTGAAGAAG TTGTGCCGCG TTTTCTCTTG
CCGATGCGAG GGGTGATCGA TAGTCCTGAT ATTCCTCTCA ATGTGTCGCG CAGTGCGCTG
CAAGCCGATC GCAAGGTGCG GAGTATTGCT GGCTTCATCG CCAAGAAAGT GGGCGATCGC
CTCAAAGAAC TCTATCGCTC GCAACGCGAC CAATATCTCA ATATTTGGTC AGATCTCAGC
ACCTTTGTGA AGTTTGGCTG TCTCAATGAT CAAAAATTCA GAGAACAGGT CAAAGAGATT
CTCGTTTTTC GGAGTAGTGC TGAGCTCAGC GAGGCGACCA GTAGCGATCG TGGTCAAGAT
AGCCAAGGTA ATTGGTACAC TACTCTGCAG GCCTACCTCG AACGCAACCA GGAAAAACAC
GAAAATCGTG TCTATTACTG TACGGATGCT GCTAGCCAAG CCACTTACAT TGAACTCTTC
CGTAAAAAAG GCCTAGAGGT GCTCTACCTC GATAGCTTTA TCGATAGCCA CTTTGTTAGT
TTGCTGGAAC AAGAGTATCA GGATGTCCGC TTTTCTCGGG TTGATGCCGA GCTAGACGAC
ACCTTACTTG AAACAGAAGA AGCTGAAATT GTTGATCCGA CAACGAACAA AACGCGTAGC
CAAACCCTGA AGGAATTATT TGAAGCAGCG ATCGCGAATT CGCGGATTAA TGTGCGCACA
GAATCCTTGA AGGATACAGA TGCCAGCGCG CCGCCTGCAA TGGTTTTATT GCCAGAAGCT
GCACGGCGCA TGCGCGAAAT GAGTGCTTTC TTGGGACAAG ATCCGGCTAA TCTACCCGAT
GACCATGTCC TGCTCGTGAA TACCGCGCAT CCTCTTGTCC AGAACATCCT TAGTCTGCAG
CAGGGGGCTA TCCTCAGCAG TGATGGACAC TCTCCAAGCC AGGTCCTGGC AGAGCAGCTC
TGTCGACACA TCTATGACTT GGCCTTGATG ACCCAAAAAG GGTTTGATGC TGAGGGAATG
AAAGCCTTCA TTGAGCGTTC TAATGCGGTC TTGACGGCGT TGACGACTCG CCAGTGA
 
Protein sequence
MAILEQGNIT IHTDNIFPII KKSLYSEHEI FLRELISNAV DAIQKLKMVS YAGELEGEIG 
DPQITLSIDR DRKQLKIADN GIGMTADEIK RYINQVAFSS AEDFIEKYKG GADQPIIGHF
GLGFYSAFIV ADRVEIETLS YQKGATPVHW TCDGSPSFEL SEGSRTERGT TIILNLSEEE
LEYLEPARIR QLVKTYCDFM PVPIALEGEV LNKQKAIWRE SAGNLKEEDY QEFYRYLYPF
QDEPLLWVHL NTDYPYQVNG VLYFPKLRPD IDLTQGQIKL FCNQVFVSDH CEEVVPRFLL
PMRGVIDSPD IPLNVSRSAL QADRKVRSIA GFIAKKVGDR LKELYRSQRD QYLNIWSDLS
TFVKFGCLND QKFREQVKEI LVFRSSAELS EATSSDRGQD SQGNWYTTLQ AYLERNQEKH
ENRVYYCTDA ASQATYIELF RKKGLEVLYL DSFIDSHFVS LLEQEYQDVR FSRVDAELDD
TLLETEEAEI VDPTTNKTRS QTLKELFEAA IANSRINVRT ESLKDTDASA PPAMVLLPEA
ARRMREMSAF LGQDPANLPD DHVLLVNTAH PLVQNILSLQ QGAILSSDGH SPSQVLAEQL
CRHIYDLALM TQKGFDAEGM KAFIERSNAV LTALTTRQ