Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1813 |
Symbol | |
ID | 3774388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1884434 |
End bp | 1886350 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637800254 |
Product | heat shock protein 90 |
Protein accession | YP_400830 |
Protein GI | 81300622 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.138988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.331097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGATTC TAGAGCAAGG CAATATCACG ATTCATACCG ATAACATTTT CCCGATTATC AAAAAGTCGC TCTACTCAGA GCATGAAATC TTTTTGCGGG AACTGATTTC TAATGCAGTG GATGCCATTC AAAAGCTGAA GATGGTGTCC TATGCCGGTG AATTAGAGGG TGAAATCGGT GACCCCCAAA TCACACTGAG TATCGATCGC GATCGCAAAC AACTCAAAAT TGCCGATAAC GGTATTGGGA TGACAGCCGA TGAGATTAAG CGTTATATCA ATCAAGTTGC CTTTTCAAGT GCAGAGGACT TTATTGAAAA ATATAAAGGC GGAGCTGATC AGCCTATCAT TGGTCACTTT GGTCTAGGCT TCTACTCAGC TTTTATTGTT GCTGATCGGG TGGAAATTGA AACCCTCTCC TATCAAAAAG GAGCGACACC TGTTCATTGG ACTTGTGATG GATCTCCAAG CTTTGAACTG TCAGAGGGGA GCCGTACGGA GCGAGGAACA ACGATTATTC TTAATCTTAG TGAGGAGGAG TTAGAGTACT TAGAACCTGC TCGTATTCGT CAGCTTGTTA AGACCTATTG TGACTTCATG CCCGTTCCGA TCGCTTTAGA GGGAGAAGTC TTAAACAAGC AAAAAGCAAT TTGGCGAGAA TCAGCTGGCA ATCTCAAAGA AGAAGACTAC CAAGAGTTTT ATCGCTACCT GTATCCATTT CAAGATGAAC CATTGTTATG GGTTCATCTC AACACAGATT ACCCCTATCA AGTGAATGGT GTTCTCTATT TCCCGAAATT GCGGCCCGAT ATTGATCTAA CTCAAGGACA AATTAAACTA TTCTGCAATC AAGTCTTTGT CAGCGATCAC TGTGAAGAAG TTGTGCCGCG TTTTCTCTTG CCGATGCGAG GGGTGATCGA TAGTCCTGAT ATTCCTCTCA ATGTGTCGCG CAGTGCGCTG CAAGCCGATC GCAAGGTGCG GAGTATTGCT GGCTTCATCG CCAAGAAAGT GGGCGATCGC CTCAAAGAAC TCTATCGCTC GCAACGCGAC CAATATCTCA ATATTTGGTC AGATCTCAGC ACCTTTGTGA AGTTTGGCTG TCTCAATGAT CAAAAATTCA GAGAACAGGT CAAAGAGATT CTCGTTTTTC GGAGTAGTGC TGAGCTCAGC GAGGCGACCA GTAGCGATCG TGGTCAAGAT AGCCAAGGTA ATTGGTACAC TACTCTGCAG GCCTACCTCG AACGCAACCA GGAAAAACAC GAAAATCGTG TCTATTACTG TACGGATGCT GCTAGCCAAG CCACTTACAT TGAACTCTTC CGTAAAAAAG GCCTAGAGGT GCTCTACCTC GATAGCTTTA TCGATAGCCA CTTTGTTAGT TTGCTGGAAC AAGAGTATCA GGATGTCCGC TTTTCTCGGG TTGATGCCGA GCTAGACGAC ACCTTACTTG AAACAGAAGA AGCTGAAATT GTTGATCCGA CAACGAACAA AACGCGTAGC CAAACCCTGA AGGAATTATT TGAAGCAGCG ATCGCGAATT CGCGGATTAA TGTGCGCACA GAATCCTTGA AGGATACAGA TGCCAGCGCG CCGCCTGCAA TGGTTTTATT GCCAGAAGCT GCACGGCGCA TGCGCGAAAT GAGTGCTTTC TTGGGACAAG ATCCGGCTAA TCTACCCGAT GACCATGTCC TGCTCGTGAA TACCGCGCAT CCTCTTGTCC AGAACATCCT TAGTCTGCAG CAGGGGGCTA TCCTCAGCAG TGATGGACAC TCTCCAAGCC AGGTCCTGGC AGAGCAGCTC TGTCGACACA TCTATGACTT GGCCTTGATG ACCCAAAAAG GGTTTGATGC TGAGGGAATG AAAGCCTTCA TTGAGCGTTC TAATGCGGTC TTGACGGCGT TGACGACTCG CCAGTGA
|
Protein sequence | MAILEQGNIT IHTDNIFPII KKSLYSEHEI FLRELISNAV DAIQKLKMVS YAGELEGEIG DPQITLSIDR DRKQLKIADN GIGMTADEIK RYINQVAFSS AEDFIEKYKG GADQPIIGHF GLGFYSAFIV ADRVEIETLS YQKGATPVHW TCDGSPSFEL SEGSRTERGT TIILNLSEEE LEYLEPARIR QLVKTYCDFM PVPIALEGEV LNKQKAIWRE SAGNLKEEDY QEFYRYLYPF QDEPLLWVHL NTDYPYQVNG VLYFPKLRPD IDLTQGQIKL FCNQVFVSDH CEEVVPRFLL PMRGVIDSPD IPLNVSRSAL QADRKVRSIA GFIAKKVGDR LKELYRSQRD QYLNIWSDLS TFVKFGCLND QKFREQVKEI LVFRSSAELS EATSSDRGQD SQGNWYTTLQ AYLERNQEKH ENRVYYCTDA ASQATYIELF RKKGLEVLYL DSFIDSHFVS LLEQEYQDVR FSRVDAELDD TLLETEEAEI VDPTTNKTRS QTLKELFEAA IANSRINVRT ESLKDTDASA PPAMVLLPEA ARRMREMSAF LGQDPANLPD DHVLLVNTAH PLVQNILSLQ QGAILSSDGH SPSQVLAEQL CRHIYDLALM TQKGFDAEGM KAFIERSNAV LTALTTRQ
|
| |