| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1795 |
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| Symbol | smpB |
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| ID | 3774370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1865979 |
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| End bp | 1866443 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637800236 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_400812 |
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| Protein GI | 81300604 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.398108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00283091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCGATT CCGGCGGCAT CAAAGTTCTG AGCGAGAATC GTCAGGCTCG TTTCCAATAC
GAAATTCTCG AAACCTTCGA GACTGGGATT GAACTTCTCG GCACGGAGGT CAAATCGATT
CGGGCCGGAA AGGTTAACCT GCGCGATGGC TTTGCTTTGG TGCGCAACGG CGAGGTTTGG
TTGCACAACA TCCATATTTC GCCGCACCAG CAGGCGAGTG CCTACTACAA TCACGACCCG
CTGCGGACGC GCAAGCTGCT GATGCACCGT GAGGAAATTC GCAAACTGAT CGGTAAGGTC
GAGCAAAAGG GGCTGACCTT AGTGCCGCTG AAGATGTATC TGAAGCAGGG CTGGGTGAAA
GTCACCCTCG GCTTGGGACG CGGTAAGAAA CTGCACGACA AGCGTGAAAC CGAGCGTCGC
CGCCAAGATC AACGGGATAT TCAGCGGGCA ATCAAGCGCG CTTAG
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| Protein sequence | MADSGGIKVL SENRQARFQY EILETFETGI ELLGTEVKSI RAGKVNLRDG FALVRNGEVW
LHNIHISPHQ QASAYYNHDP LRTRKLLMHR EEIRKLIGKV EQKGLTLVPL KMYLKQGWVK
VTLGLGRGKK LHDKRETERR RQDQRDIQRA IKRA
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