| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1789 |
|---|
| Symbol | |
|---|
| ID | 3774364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1860032 |
|---|
| End bp | 1861012 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637800230 |
|---|
| Product | heat shock protein DnaJ-like |
|---|
| Protein accession | YP_400806 |
|---|
| Protein GI | 81300598 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0101299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGA CGGACTTCAA AGACTACTAC GCAACCCTCG GAGTGGGGCG TGCTGCCAGT
GCCGATGAGA TCAAAAAAGC TTTCCGTAAG CTGGCTCGCC AGTACCACCC CGATATGAAT
CCGGGCGACA AGGTTGCTGA GGCACGCTTT AAGGAAATCA ACGAAGCTTA CGAGGTGCTC
TCCGACACCG ATAAGCGCCG CAAGTACGAC CAGTTTGGCC AATATTGGAG CCGAGTTGGT
GGCCCCACAG GTGGCCCAGG GCCTGGGGTC GGCTTCGAGG ACTTTGAGTT TGGCCGCTAT
GGCAGCTTTG ATGACTTCAT CAACGAACTG CTCGGCCGTT TTGGCGGCGG CGCGACGGCT
AGCGCCAGTG CCGGTTATCG CAGTCCTGGT TTTCAGGATT TTGCCGGCGG TTTTGGTAGC
CAGGCCACTG CTGGGGCTCG TGCCGTCAAT TTGGATGCTG AAGCCAGTAT TAGTCTCAGC
CTCAGCGATG CTTTTCGGGG GACGCAAAAG CAGCTCCGCA TCAACAGCGA AATGGTTGAG
GTCAAGGTGC CGGCTGGCAT CAAAGCAGGG AGTAAACTGC GCCTGCGGGG CAAGGGCAAC
ATCATGCCCA ATACGGGCAA GCGCGGCGAT CTCTACCTGA AGATTGAGGT TAAGCCCCAC
GAGTTTTTCC AGCTAGAGGG CGACCAGTTG AGCTGTGAGG TGCCGATCGC ACCGGATGAA
GCAGCCCTCG GTGCCACGAT CGCGGTTCCC ACACCGGATG GCTTGGTCAA CGTCACGATT
CCGGCCGGAG TTCGCACCGG ACAATCCCTG CGGCTGCGGG GTAAGGGCTG GCCAACTCGC
ACGGGCCGCG GGGATCTGCT GGTGAAAGTG GCGATCGCGG TACCGAAAAG CCTGACCGAG
GCAGAACGTC AGGCCTACGA ACAGTTGCAG CGGTCGCGCA GTACCGATCT GCGATCGGCA
CTCATGCAAT ACAGCCTCTA G
|
|---|
| Protein sequence | MAATDFKDYY ATLGVGRAAS ADEIKKAFRK LARQYHPDMN PGDKVAEARF KEINEAYEVL
SDTDKRRKYD QFGQYWSRVG GPTGGPGPGV GFEDFEFGRY GSFDDFINEL LGRFGGGATA
SASAGYRSPG FQDFAGGFGS QATAGARAVN LDAEASISLS LSDAFRGTQK QLRINSEMVE
VKVPAGIKAG SKLRLRGKGN IMPNTGKRGD LYLKIEVKPH EFFQLEGDQL SCEVPIAPDE
AALGATIAVP TPDGLVNVTI PAGVRTGQSL RLRGKGWPTR TGRGDLLVKV AIAVPKSLTE
AERQAYEQLQ RSRSTDLRSA LMQYSL
|
|---|
| |