| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1761 |
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| Symbol | |
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| ID | 3775463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1827800 |
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| End bp | 1829530 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800202 |
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| Product | hypothetical protein |
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| Protein accession | YP_400778 |
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| Protein GI | 81300570 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGGGA ACAAGTGCAA ATGTTGCGGT TCTCGGTACA TTAGGCAAGG ATTCCTTGGG
CAAAGAAAAT TCCCTGACCT TGGATCCGCT GACCCTCTAT CCTGCTCTTT TGTTCAGACA
CCCTACATGG CTGCTTTTCT CTACCGTCTC TCTTTTCTGA GCGCTCTGGC GATCGCAGCT
CATGGTGTGA CCCCCCCTAC CGCGATCGCA GAGCTGGCTG AGGCAACCAC AGCGGAGCCA
ACCCCTACAG TCGCTCAGGC CACCACACCA CCTGCGACGA CACCGACGAC CACTCCAGCA
CCGGGTCCGG TCAAGGAAGT TGTTCCTGAC GCAAATCTAC TCAAAGAGCT GCAGGCGAAT
CCCAATCCTT TCCAGCTACC CAATCAACCC AATCAAGTCA AAACCGAGGC GCTTCAGCCC
CTGACCTTGG AACAGGCCCT CAACCTAGCT CGCCTCAATA ACCCTCAGAT TCAAGTTCGG
CAGCTACAGG TTCAACAACG ACAGGCCGCT CTACGGGGCA CCGAAGCAGC GCTCTACCCA
ACCTTGGGGC TTCAAGGCAC TGCCGGCTAT CAACAAAATG GAACCAGACT AAACGTGACT
GAGGGCACTC CCACCCAGCC CACAGGCAGC AGTCTCTTCA CGACCTTGGG CGAAAGCTCG
ATTGGAGCCA CCCTCAACCT CAATTACACG ATTTTTGATT TTGTTCGGGG GGCCCAGCTC
GCTGCCAGCC GCGACCAAGT CACCCAAGCA GAGCTGGATC TCGAAGCGGC CCTTGAGGAT
CTACAGCTCA CGGTTTCCGA GGCCTATTAC CGCCTGCAGA ATGCGGACCA GCTCGTTCGG
ATTGCCCGCG AGTCAGTCGT TGCCTCTGAA CGTAGCTTGA AGGATGCCGA AGCCCTGTTC
CGCGCTGGAG TCGGGACTCA ATTCGATGTG TTGCGCCAAC AGGTTCAGCT TGCCCAAGAC
CAACAAAACT TGGTTGACAG CATCGGCAAC CAGGACAAAG CCCGCCGCGC CCTAGTCCAG
GCTCTCAACC TGCCGCAAAA CGTCAATGTT TTGACGGCGG ACCCCGTGGA GCTGGCCGCA
CCCTGGAATC TCAGCCTCGA TGAGAGTATC GTGCTCGCCT TCCAAAATCG TCCGGAACTA
GAGCGAGAAG TGCTGCAGCG CAACATTAGC TACAACCAAG CCCAGGCAGC GCGGGGCCAA
GTGTTACCGC AGTTGGGCCT GCAGGCATCC TATGGCGTCA ATGGGGCGAT TAACAGCAAC
CTTCGCAGTG GTAGCCAAGC GCTCACCTTC CCGTCACCGA CCCTCACCAA TACCAGCAGC
TACAACTATT CGATTGGTTT GGTGCTAAAC GTGCCGCTAT TTGATGGCGG TCTGGCCAAT
GCCAACGCCC AGCAACAGGA ACTGAACGGC CAAATTGCCG AGCAGAACTT TGTTCTGACT
CGTAACCAAA TTCGGACGGA CGTGGAGACG GCTTTCTACG ATCTCCAGAC CAACTTGGCC
AATATTGGCA CGACCCGTAA GGCGGTTGAG CAGGCTCGGG AAGCGCTACG GTTGGCACGG
CTCCGCTTCC AAGCCGGTGT TGGTACTCAG ACGGAAGTGA TTGATTCGCA GCGAGATCTA
ACAAGAGCTG AAGCTAACGC CCTCAACGCG ATCACGGCCT ACAACTTGGC GCTGGCACGG
ATCAAACGGG CCGTCAGCAA CGTCAACAAT CTGGCACGTG CGGGGGGCTG A
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| Protein sequence | MIGNKCKCCG SRYIRQGFLG QRKFPDLGSA DPLSCSFVQT PYMAAFLYRL SFLSALAIAA
HGVTPPTAIA ELAEATTAEP TPTVAQATTP PATTPTTTPA PGPVKEVVPD ANLLKELQAN
PNPFQLPNQP NQVKTEALQP LTLEQALNLA RLNNPQIQVR QLQVQQRQAA LRGTEAALYP
TLGLQGTAGY QQNGTRLNVT EGTPTQPTGS SLFTTLGESS IGATLNLNYT IFDFVRGAQL
AASRDQVTQA ELDLEAALED LQLTVSEAYY RLQNADQLVR IARESVVASE RSLKDAEALF
RAGVGTQFDV LRQQVQLAQD QQNLVDSIGN QDKARRALVQ ALNLPQNVNV LTADPVELAA
PWNLSLDESI VLAFQNRPEL EREVLQRNIS YNQAQAARGQ VLPQLGLQAS YGVNGAINSN
LRSGSQALTF PSPTLTNTSS YNYSIGLVLN VPLFDGGLAN ANAQQQELNG QIAEQNFVLT
RNQIRTDVET AFYDLQTNLA NIGTTRKAVE QAREALRLAR LRFQAGVGTQ TEVIDSQRDL
TRAEANALNA ITAYNLALAR IKRAVSNVNN LARAGG
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