| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1699 |
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| Symbol | |
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| ID | 3775398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1765464 |
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| End bp | 1766852 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637800137 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_400716 |
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| Protein GI | 81300508 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.4571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGAACCA TTCGGGCTGA GCTGCAACAG TTCCTGCAGC TAGCGATTCC CTTGGCGGCT
GCCCAAGTTG CTCAGGCGGC AGTGGGCTTT GTCGATACGG TGATGATGGG GCGACTCGGC
CCGGAGCCCT TGGCGGCTGG GGGCTTAGCT TCAGCCCTTT TCCAGTTCAT TTTGGCCACG
GCTAGCGGGG TCGTGATGGC AGTCAGCCCG CTGGTAGCGG AGGCCCAGGG AGCGGGTAAA
GACTACAAAA TTGCGGCGAT CGCGCGACAA GGTCTGTGGC TGTCGGTGCT GCTGGGGCTG
CCGGTGATGC TGATCATCAG CCAGCTTGCC CGCCTGATGC CAGTGCTGGG GCAGTCGGCA
ACCACGATCG CCCTGGCCCG AGACTACTGG ATGGCAGTGC TCTGGGGCAT CATTCCCGGC
CTTGGGTTTG CCATGCTGCG GGGCTACGTT GCAGCCCTTG AGCAGGCTCG GATTATCCTG
CCGTTGGTGT TGTTTGGCAC GCTAGTCAAC GGACTGGGTA ACTATTTGCT GGGCTACGGA
CAGCTAGGGT TTCCACGGCT GGAACTAACG GGCTTGGGCC TCTCAAGTGC CCTGGGGCTC
TGGGTGATGT TTTTGGGCCT GCTCGCCTAT ACCGCCTGGC AGCCGAAGCT GCGCCGCTAT
CCCTTTTGGC AGGACTGGCG ACGGCTGCAG CCGTCGATCT GCCGTCAGAT TTTGCAATTG
GGCTGGGCGA TCGCGGTCAC GGTGGCCGTG GAATTTGGCC TGTTTACAAT CATCACAATT
TTGATGGGAG CGATCGGCGT CGAGGCTTTG GCCGCCCATC AGACAGTTTC CCAAACAATC
ATCTTGATTT TCATGGTGCC CTTGGGCTGT TCCTTCGCCG TAACTGTGCG CGTTGGCTGG
TGGTTGGGTC GCCAGGATGG CCTTGGAGCT CGACGTGCCG GTCTGGTGGG AGTAGGGGCG
ATCGCCCTGT GGATGCTGTT ACTGGCGATC CCTCTGGCTC TATTCCCCCG CGCGATCGTC
GGTATCTACG TGGATCTCAA CAATCCTGTC AATGCCGGAC TATTGAACTT GGCTTTACCC
ATGCTGCGCG TTGCCTCCCT GGCGCTGGTG CTCGATGGTG TGCAGCGTGT CGCGATGGGA
GCGCTACATG GCCTGCAAGA TACTCGCATT CCGCTGCTGC TTAGTCTGCT GGCTTTTTGG
ATGGTTGGGG TCGGCAGTAG CGCGATGCTA GGGTTTCAAT TGGGTTGGGG CAGCACCGGT
CTCTGGATTG GTCAATCTTT GGGCGTGGCG ATCGCAGGGG GACTGTTCCT GCAGCGCTTT
TTGAAATTGA CCCAAAATCG AACATTCAAG CAACGCCTGC AGCCTCAGCC GCTAGCTACT
CATCCCTAA
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| Protein sequence | MRTIRAELQQ FLQLAIPLAA AQVAQAAVGF VDTVMMGRLG PEPLAAGGLA SALFQFILAT
ASGVVMAVSP LVAEAQGAGK DYKIAAIARQ GLWLSVLLGL PVMLIISQLA RLMPVLGQSA
TTIALARDYW MAVLWGIIPG LGFAMLRGYV AALEQARIIL PLVLFGTLVN GLGNYLLGYG
QLGFPRLELT GLGLSSALGL WVMFLGLLAY TAWQPKLRRY PFWQDWRRLQ PSICRQILQL
GWAIAVTVAV EFGLFTIITI LMGAIGVEAL AAHQTVSQTI ILIFMVPLGC SFAVTVRVGW
WLGRQDGLGA RRAGLVGVGA IALWMLLLAI PLALFPRAIV GIYVDLNNPV NAGLLNLALP
MLRVASLALV LDGVQRVAMG ALHGLQDTRI PLLLSLLAFW MVGVGSSAML GFQLGWGSTG
LWIGQSLGVA IAGGLFLQRF LKLTQNRTFK QRLQPQPLAT HP
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