Gene Synpcc7942_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1695 
Symbol 
ID3775394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1762639 
End bp1763637 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content48% 
IMG OID637800133 
Producthypothetical protein 
Protein accessionYP_400712 
Protein GI81300504 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAC CCCAGCACTT TCTAGTTTTG AATCTCAGCC TTTTGACAGG TCTCATTCAG 
ACTCCAGCGA TCGCTACTAG TGCTGAACAG TCTTTGGTGA TCAAGGCCAA GCAACCACTG
CTGTTAGCTC AAAACCAAGC TAAGCGGCGC ATTGCTGTAT TGGACTTTGA CTTCAGCAAT
GTCAGTTCTC CCTCTGTCCT TTCCGCTTTT CCTAACGTCT CTAAAGGTGT CAGCGATATT
CTGGTCAATC GACTCGTAAA AGATGGCACC TACACATTGA TTGAACGGAG TCGCATTGAC
GCCGTACTCA ATGAACAAAA TCTAGGGGCT TCAGGACGGA TTGATCCCTC CACTGCCGCT
CAAATTGGCA AGATTTTAGG CGTCGATGCC GTCATTATCG GCTCTGTCAC ACGCCTCGAT
CTGCAAACTC GGCAATCTGG CGGTTCCTTC CTGTTTGGTA TTGGCGGTAA CTCCACCGAT
GTCGATGCCT ACGCCCAAAT CAATATTCGA ATGGTAAGCA CCTCCACAGC CGAAATTTTG
GCTGTGGCAG AGGGAACGGG CAATATTAGC CAATCTGATT CACGGGTTAC TGTTTTGGGA
ATTGGGGGTG GTTCTCAAAC CTTTAACCCA GAAAAATTAG TCTTTATCGC CACAGAGCAA
GCCATTGACC AAGTTGCCAA AGAGGTGATC AATGCCTCTG AAAAGCTACA AGCGATCGCC
CCAGTCTCTC CTTCGATTAA TGCTGTCGTT GCAGCGGTTG TCGGACGTCA AGTCATTTTA
AACAAAGGAA CCTCTGCGGG TATCCGAGTG GGTTCTCGAA TTGTGATTGA GCGCGTCACT
CAAGTTATTA AAGATCCAAC AACGGGGCAA GTGATTCGCC GTCTCAGCCA ACCCATTGGT
CAGATCAGAA TTACAGAAGT CGATAGCACT TCTAGTGTTG GTGAAATTGT CTCTGGCTCT
CAGTTCAAAG TGGGAGATAT TGCAAAGTTC GCCAATTAA
 
Protein sequence
MLKPQHFLVL NLSLLTGLIQ TPAIATSAEQ SLVIKAKQPL LLAQNQAKRR IAVLDFDFSN 
VSSPSVLSAF PNVSKGVSDI LVNRLVKDGT YTLIERSRID AVLNEQNLGA SGRIDPSTAA
QIGKILGVDA VIIGSVTRLD LQTRQSGGSF LFGIGGNSTD VDAYAQINIR MVSTSTAEIL
AVAEGTGNIS QSDSRVTVLG IGGGSQTFNP EKLVFIATEQ AIDQVAKEVI NASEKLQAIA
PVSPSINAVV AAVVGRQVIL NKGTSAGIRV GSRIVIERVT QVIKDPTTGQ VIRRLSQPIG
QIRITEVDST SSVGEIVSGS QFKVGDIAKF AN