Gene Synpcc7942_1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1668 
Symbol 
ID3775740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1737882 
End bp1739552 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content59% 
IMG OID637800106 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_400685 
Protein GI81300477 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.961153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTT TGTTAGAAGT TGGACTCACC CTCTTGCCGG TGATTCTGAT GACGCCCCTG 
TTGGGGAATT ATCTGTGGCG CGTTTTTAGT GATCAATCTA GTCTGCTCGA TCGCCTCTGC
ACTCCCTGGG AGCAACGTCT CTTTCGCTGG ATCACCGTTG ACTCCAGTCA GTCGATGCCC
ACCGGTCAGT ATCTGCGATC GCTCCTCTGG GTTAATGCCG TTACCGCAGT TCTCAGTTGG
GGGTTACTCT CACTCCAGGC TTGGCTACCA CTCAACCCCA GTCAGCGATC GCCTCTGCGC
TGGGATTTGG CCCTGCACAC GATCATTTCC TTCGTCACCA ACACCGACCA GCAGCACTAC
AGCGGTGAGC TCAGCCTCAG CAATGCCAGC CAGATCGGGG TGATCGGCTT TTTGATGTTT
ACCTCAGCAG CTACGGGGCT GGCAGTAGGT ATCGCTTTTG TCCGCGGCCT CGCCGGTCAG
GGGCTGGGGA ACTTTTATCG CGACTGGACC CTCAGCCTGA CGCGAGTGCT GATCCCACTC
TCCTTCAGCT TTGCCGTGAT CTTGCTGGCG CTGGGGGTGC CTGAAACCCT CGATGGGGTG
GCGATCGCTC AGACCTTGGA TGGCTCGACT CAGGCAATCG CTCGGGGCCC GATCGCCCAC
CTTGAGGCAA TCAAACTCTT GGGGGAAAAC GGCGGCGGAT TTCTGGCAGC CAATTCGGCC
CATCCCTACG AAAACCCCAG CGCCCTCAGC AACTGGCTCG AAGCGATCGC CATGCTGGCC
ATTCCCGCAG CGCTACTCGA CACCTATGGT CGCTTCCTAG GCAATCGACG ACAGGCCTGG
CTGCTGTTGG CCTTGGCAAC CGCACTGTTG CTGGCCCTCG TCAGCCTCAC TGCCAGCAGT
GAAGCCGCCG GTAATCCTCT GCTACAAACT TGGCTGCAAG GCCCCAACTT GGAAGGGAAG
GAAGTGCGGT TTGGCTGGCT GCAATCGTCC TTCTGGTCTG TGATCACCAC CAGCACCATG
ACCGGCGCAG TCAACGCCGA TCTCGATTCG CTGATGCCTT TGAGTGACCT CGCCCTGCTT
TTTGCCCTAT TTCTGCAGGT CATCTTTGGC GGGCAGGGAC TGGGCGCCGC CTACCTCATC
ATCTTTGTGC TGCTCAGCAT TTTCGTGACG GGGCTGATGG TCGGTCGCAC GCCGGAATTC
CAGGGCCGCA AAATCGAGAA GCCTCAAGTC GTTCTCGCCA GCCTGATCCT GCTGATCCAT
CCGCTCTTCG TCCTAATTCC AGGCGCGATC GCCCTCTCCC AACCCGATAT TGTTCAGGGG
CTGAGCCAAG CCGGTCCCCA CGGGGTCAGC CAAGCCATCT ACGAATACGC CTCCGCCAGT
GCCAACAACG GTTCTGGGCT AGAAGGGATC GCCGACGACA CACTCTGGTG GAACCTCAGT
ACCAGTGTGA GTCTGCTCGG AGGTCGCTTT ATTCCGATCG CAGCACTCTT GGCCTTGGCG
GCTGGCTTTG GTCAAAAGCC CCAACTCCCC CCGACGGCCG GCAGCCTGCG CAGCGATACG
CCCCTGTTTA CTGGCGTCAC CGCGATTGTG GTCGTCATTC TGGGGGCTTT GACCTTTTTC
CCCGTGCTGG CGCTGGGGCC GATCGCCGAA GCTCTGCAGG TCTATCGCTA A
 
Protein sequence
MLRLLEVGLT LLPVILMTPL LGNYLWRVFS DQSSLLDRLC TPWEQRLFRW ITVDSSQSMP 
TGQYLRSLLW VNAVTAVLSW GLLSLQAWLP LNPSQRSPLR WDLALHTIIS FVTNTDQQHY
SGELSLSNAS QIGVIGFLMF TSAATGLAVG IAFVRGLAGQ GLGNFYRDWT LSLTRVLIPL
SFSFAVILLA LGVPETLDGV AIAQTLDGST QAIARGPIAH LEAIKLLGEN GGGFLAANSA
HPYENPSALS NWLEAIAMLA IPAALLDTYG RFLGNRRQAW LLLALATALL LALVSLTASS
EAAGNPLLQT WLQGPNLEGK EVRFGWLQSS FWSVITTSTM TGAVNADLDS LMPLSDLALL
FALFLQVIFG GQGLGAAYLI IFVLLSIFVT GLMVGRTPEF QGRKIEKPQV VLASLILLIH
PLFVLIPGAI ALSQPDIVQG LSQAGPHGVS QAIYEYASAS ANNGSGLEGI ADDTLWWNLS
TSVSLLGGRF IPIAALLALA AGFGQKPQLP PTAGSLRSDT PLFTGVTAIV VVILGALTFF
PVLALGPIAE ALQVYR