Gene Synpcc7942_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1627 
Symbol 
ID3775696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1695554 
End bp1696852 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content59% 
IMG OID637800063 
Producthypothetical protein 
Protein accessionYP_400644 
Protein GI81300436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0957516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0248314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGC TACAGCCCTT AGTTCAAGCG ATCGAGCGTT TGGGCTATCG CGTCACGGTT 
GGTGATGTTG CAGCCCAGTC GGGTCTGCGC GTGGCTTTGG TCGAGCATCA ACTCTTGCAG
TTGGCGGCGG CGAGTCAGGC GACCCTTCAA GTCAGCGATC GCGGCGACAT TGCATTTCAG
TTCCCGCACA ACCTCCGGCA GCGTTTGCAG CAGGAGTCAT GGCGGCAGCA ATTGCAACTG
CTCGGGCAGC AGCTGTGGCG TCTGCTTTTC TACCTGATCC GCATCTCGTT TGGTCTGGGC
CTGCTGCTAT CGATTGGTCT TTTCGTCGTG GCAATCATCG CTATCGTAGT CGCCCTGAGC
GAGGGGGGCG ATATCGGCGG CGGTGGTGGT GGAGATAGTA GTGGTGGGAG TGGTTCCAGT
GGATCCAGCG CCCCTAGCTG GGGAGGAGAT TGGTGGCCTT GGCTAACCTT CGATGGGCCG
AGTCATCCCA ACTCTGAGCG GCGATCGCTC AACTTTCTCG AAGCAATTTT TTCCTTTCTC
TTCGGGGATG GCGACCCCAA TGCCGATCTC GAACAGCGGC GCTGGCAGTT GATGGGCGCT
TACATCCGCA GCCAACAGGG GGCTGTGGTC GCTGAGCAAT TGCAGCCCTA CCTGGATCGC
CCCTTAGATT CCAGCGAGTC TGATCTCCTG CCCGTGCTGG TGCGTTTTGA TGGTCAGCCT
CGCGTTAGTG AAAGGGGCCA GCTGATTTAC CAATTTCCTG CCCTGCAGGT CACGGCGAGT
GCCGCTGACG GCCGATCACG GGTTGCCCGC AGCTTGCAAG AGCGTCTCTG GTCCTTCAGT
CAAGCCAGTC GCGGACAAAT CCTTGGGGCG ATCGCCTTGG GGGTCGTCAA TCTCGTGCTC
GCGGCGGTCT TCGGTGGTCT GCTCCTATTG CCTGGCGTTG CCAGCCTCGG GGGAATCGTG
GCAGTAGTGG CCGGGTTATA TCGGTTCCTG CTGGTCTACG CGATCGGCTT TTTAGCTGTG
CCAGCCCTGC GCTGGTTGTG GATCCAACGC AAGAATCAAG AAATCCGTCG CCGCAACCGC
GATCGCCAGA GCTGGGCCGA TCGCCTGCGT AAACCATCGT TGGCCCTGGG AGAGAAACTT
ATGCAACTGG CACCTTGGCG AACCCAAGCC AAAATTGACC CCGATAAGTT GATCTACAGT
GGCGATCGGG ACTTATTAGA CCAGGAATTT GCACAAGACT CAGCGATCGC AGCCGAATGG
CAAACTCGTC TGATGCAGAC TGACCCTGAG GAACCTTAA
 
Protein sequence
MEELQPLVQA IERLGYRVTV GDVAAQSGLR VALVEHQLLQ LAAASQATLQ VSDRGDIAFQ 
FPHNLRQRLQ QESWRQQLQL LGQQLWRLLF YLIRISFGLG LLLSIGLFVV AIIAIVVALS
EGGDIGGGGG GDSSGGSGSS GSSAPSWGGD WWPWLTFDGP SHPNSERRSL NFLEAIFSFL
FGDGDPNADL EQRRWQLMGA YIRSQQGAVV AEQLQPYLDR PLDSSESDLL PVLVRFDGQP
RVSERGQLIY QFPALQVTAS AADGRSRVAR SLQERLWSFS QASRGQILGA IALGVVNLVL
AAVFGGLLLL PGVASLGGIV AVVAGLYRFL LVYAIGFLAV PALRWLWIQR KNQEIRRRNR
DRQSWADRLR KPSLALGEKL MQLAPWRTQA KIDPDKLIYS GDRDLLDQEF AQDSAIAAEW
QTRLMQTDPE EP