Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1627 |
Symbol | |
ID | 3775696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1695554 |
End bp | 1696852 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800063 |
Product | hypothetical protein |
Protein accession | YP_400644 |
Protein GI | 81300436 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0957516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0248314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGAGC TACAGCCCTT AGTTCAAGCG ATCGAGCGTT TGGGCTATCG CGTCACGGTT GGTGATGTTG CAGCCCAGTC GGGTCTGCGC GTGGCTTTGG TCGAGCATCA ACTCTTGCAG TTGGCGGCGG CGAGTCAGGC GACCCTTCAA GTCAGCGATC GCGGCGACAT TGCATTTCAG TTCCCGCACA ACCTCCGGCA GCGTTTGCAG CAGGAGTCAT GGCGGCAGCA ATTGCAACTG CTCGGGCAGC AGCTGTGGCG TCTGCTTTTC TACCTGATCC GCATCTCGTT TGGTCTGGGC CTGCTGCTAT CGATTGGTCT TTTCGTCGTG GCAATCATCG CTATCGTAGT CGCCCTGAGC GAGGGGGGCG ATATCGGCGG CGGTGGTGGT GGAGATAGTA GTGGTGGGAG TGGTTCCAGT GGATCCAGCG CCCCTAGCTG GGGAGGAGAT TGGTGGCCTT GGCTAACCTT CGATGGGCCG AGTCATCCCA ACTCTGAGCG GCGATCGCTC AACTTTCTCG AAGCAATTTT TTCCTTTCTC TTCGGGGATG GCGACCCCAA TGCCGATCTC GAACAGCGGC GCTGGCAGTT GATGGGCGCT TACATCCGCA GCCAACAGGG GGCTGTGGTC GCTGAGCAAT TGCAGCCCTA CCTGGATCGC CCCTTAGATT CCAGCGAGTC TGATCTCCTG CCCGTGCTGG TGCGTTTTGA TGGTCAGCCT CGCGTTAGTG AAAGGGGCCA GCTGATTTAC CAATTTCCTG CCCTGCAGGT CACGGCGAGT GCCGCTGACG GCCGATCACG GGTTGCCCGC AGCTTGCAAG AGCGTCTCTG GTCCTTCAGT CAAGCCAGTC GCGGACAAAT CCTTGGGGCG ATCGCCTTGG GGGTCGTCAA TCTCGTGCTC GCGGCGGTCT TCGGTGGTCT GCTCCTATTG CCTGGCGTTG CCAGCCTCGG GGGAATCGTG GCAGTAGTGG CCGGGTTATA TCGGTTCCTG CTGGTCTACG CGATCGGCTT TTTAGCTGTG CCAGCCCTGC GCTGGTTGTG GATCCAACGC AAGAATCAAG AAATCCGTCG CCGCAACCGC GATCGCCAGA GCTGGGCCGA TCGCCTGCGT AAACCATCGT TGGCCCTGGG AGAGAAACTT ATGCAACTGG CACCTTGGCG AACCCAAGCC AAAATTGACC CCGATAAGTT GATCTACAGT GGCGATCGGG ACTTATTAGA CCAGGAATTT GCACAAGACT CAGCGATCGC AGCCGAATGG CAAACTCGTC TGATGCAGAC TGACCCTGAG GAACCTTAA
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Protein sequence | MEELQPLVQA IERLGYRVTV GDVAAQSGLR VALVEHQLLQ LAAASQATLQ VSDRGDIAFQ FPHNLRQRLQ QESWRQQLQL LGQQLWRLLF YLIRISFGLG LLLSIGLFVV AIIAIVVALS EGGDIGGGGG GDSSGGSGSS GSSAPSWGGD WWPWLTFDGP SHPNSERRSL NFLEAIFSFL FGDGDPNADL EQRRWQLMGA YIRSQQGAVV AEQLQPYLDR PLDSSESDLL PVLVRFDGQP RVSERGQLIY QFPALQVTAS AADGRSRVAR SLQERLWSFS QASRGQILGA IALGVVNLVL AAVFGGLLLL PGVASLGGIV AVVAGLYRFL LVYAIGFLAV PALRWLWIQR KNQEIRRRNR DRQSWADRLR KPSLALGEKL MQLAPWRTQA KIDPDKLIYS GDRDLLDQEF AQDSAIAAEW QTRLMQTDPE EP
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