Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1607 |
Symbol | |
ID | 3775674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1672123 |
End bp | 1673679 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637800041 |
Product | porin; major outer membrane protein |
Protein accession | YP_400624 |
Protein GI | 81300416 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.657278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTT TCGTCAAAGC AGGCCTAGTG GTCACTGGTG CCAACCTGCT TGCGATCGCG CCGGGTCAAG CACTGAGCCT TGATCAGCTC CAAAAAATTG ATGCTGTGAC GCCAGATGGC ATCACCTCAG GACAAATCAC TTCAGTTAAC GAATTGAGTG ATGTCAAACC AACCGACTGG GCCTATCAAG CGCTGCAGTC TTTGGTCGAG CGGTATGGCT GCATTGTGGG TTATCCCGAC CGCACCTTCC GGGGAGCCCG ACCACTCAGT CGCTATGAAT TTGCGGCAGG TCTCAACGCT TGTCTCGACA AGGTAATTGA GTTTGCTGCT TCCAAAGAAG ATCTCGATAC CCTCAAACGC CTCACCGAAG AATTTCAAGC AGAACTCGCG ACGCTGCGCG GGCGAGTCGA TGCCTTGGAA GCCCGCACTA AAGAACTGGA AGCAACTCGA TTCTCCAGCA CGACCAAGCT CCGAGGCGAG GTCATCTTTG GTCTGGATGC CTTGGCCAAC AGCAACGGTA ATGAGGTCAA CAGCAATGGC GCTGTCTCCT TCGGCAACAA AGTCGACCTA GACTTAGACA CCAGCTTCAC TGGCAAAGAC CTCCTGAAAA CAAGGCTGCG CGCCCGCAAC ATTGAGCCAA TTACCAACCG GTTGGCCCCA GGTTTTAGAG CGCCAGGTTC CGTGCTTGAC TACGGCGGTA ACTCCAACAA CACCTTCTTC ATCGACAAGC TCTACTACAC TTTCCCCGCC GGCAGCGTTC GCTTCACCGT TGGAACGGTA GGGGTTGGCG TACAGGAGTA TGGTATGCGC GACGCCACCT TCTCGAGCGG AGCGAATGAA GGCAAGACGT TTCGCAAAGG CCCTGCCAAC ATCTACGAAA GTAACGGTAA GGCTGGCGTT GGTTTCGACT GGCGTATCAA CCCGAACTTC AGCTTCCAGT TGGGCTACCT CAACCGAGGT GCTGACCAAG TGGGCGTAGA TCAGGGCGGT TTCTTTGGAC AAGGAACCGT TGGCACCGCT AAATCGGGTT GGGATGTGGC AACCCAGTTG CGGTTTGAAA CGGATAACCG CAAATTCCGA GCGGCATTAG CCTATAGCCT ACGTAACGAT CGCTATGTCA CTGATTTAGG CACAACCCGC GCTGAGCGCC CCTTCGGTGC AGCCAACTAC AACACCAACA ACCTTGCTCT GACGATGGGC TGGGCAGTCA GCGATAACTT CACGATTTCG GGTGCGTATG GCATTGGCTT CGCGAATGTC GCTGGCGGTT CTGACAGTGC CACCATTCAG ACCTGGAATG TCGGTCTGAC CTTCCCTGAT CTGTTTGCGA AGGGTAATTC TGGCGTGATT ACAGTGGGAC AAATGCCCTA CGTAACCAGT GCTAGCCAAC AGTCGGCTGA AGACACCGGC TCGTTGGGAT TGGAAGTGAA CTATAAGTTC CAAGTGACGG ACAATATTTC GATCACGCCT GGGATTTATC TGTTCAACAA TACGAACGGT CTTGAGAACG GCGGAACCAG CTACGTTCCC TATCTGAGAA CCATCTTCCG CTTCTGA
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Protein sequence | MNFFVKAGLV VTGANLLAIA PGQALSLDQL QKIDAVTPDG ITSGQITSVN ELSDVKPTDW AYQALQSLVE RYGCIVGYPD RTFRGARPLS RYEFAAGLNA CLDKVIEFAA SKEDLDTLKR LTEEFQAELA TLRGRVDALE ARTKELEATR FSSTTKLRGE VIFGLDALAN SNGNEVNSNG AVSFGNKVDL DLDTSFTGKD LLKTRLRARN IEPITNRLAP GFRAPGSVLD YGGNSNNTFF IDKLYYTFPA GSVRFTVGTV GVGVQEYGMR DATFSSGANE GKTFRKGPAN IYESNGKAGV GFDWRINPNF SFQLGYLNRG ADQVGVDQGG FFGQGTVGTA KSGWDVATQL RFETDNRKFR AALAYSLRND RYVTDLGTTR AERPFGAANY NTNNLALTMG WAVSDNFTIS GAYGIGFANV AGGSDSATIQ TWNVGLTFPD LFAKGNSGVI TVGQMPYVTS ASQQSAEDTG SLGLEVNYKF QVTDNISITP GIYLFNNTNG LENGGTSYVP YLRTIFRF
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